Gene PHATRDRAFT_36473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36473 
Symbol 
ID7201587 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand- 
Start bp546786 
End bp547510 
Gene Length725 bp 
Protein Length229 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181025 
Protein GI219120579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.866021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTG TCGACGCAGA GTCGAAGTGG GAAGGTGAGT CCATCCGTGT TTTCCCATTC 
ACCGGAAAGG ACAAGAAATT ATGGCGAGCC TGGAGTCGTA AAACGTTGGC TGTCGGAAAA 
GGGAAGAAAT GGGAGAAGGC GTTGACGCAT GATCTGAATA TTGAGGAAAT TCAGAAGAAA 
GAAAAGAAAT TGAGTGACGA AGAAAGGAAG GCGCTGTCGA TGAACGACGC AGCGTGGAGC 
TACCTTGTGT GGGCATGCCA AGACAGGGCA TTTAACATTG TTGATAAAGT GAAGGACAAT 
GTGGCATTCA AAGCCTGGCA GATGTTGAAG AAGAAATACG AACCGAAGGA GGTTGATGCG 
TATATTCAGC TGCAGGATGA GTTTCAGGAA TGCAAGATGG AGTCGGATAA AGATGATCCG 
ACAATTTTTA TCGAAGAACT CGAAGTTATC AATGGATGCA TGGGAGCCAT TCAGGATAAG 
TATGAGAAGG ATGATGTGGA AATGATTTCG CATATCTTCT CGAAGTTGCC GGTTTCGTAC 
TCGGAGTTCA TAACAAGTCA GAAAACGAAA GGCATTCAGA ATACATCAGT CGAGGACATT 
AAAGATGCTC TCAAGGAGTA TTGGAAAAGA ACAATCAAGA CGTCGACAAA AACGTCAGTG 
ACAGAAGAGA AAGCTCTATC GGTTTCAGAC GGAAAACCGA AAGGAAAGAG CGGAGGACGA 
TTTAG
 
Protein sequence
MSTVDAESKW EGESIRVFPF TGKDKKLWRA WSRKTLAVGK GKKWEKALTH DLNIEEIQKK 
EKKLSDEERK ALSMNDAAWS YLVWACQDRA FNIVDKVKDN VAFKAWQMLK KKYEPKEVDA 
YIQLQDEFQE CKMESDKDDP TIFIEELEVI NGCMGAIQDK YEKDDVEMIS HIFSKLPVSY 
SEFITSQKTK GIQNTSVEDI KDALKEYWKR TIKTSTKTRK TERKERRTI