Gene PHATRDRAFT_36423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36423 
Symbol 
ID7201559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp412096 
End bp413100 
Gene Length1005 bp 
Protein Length334 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180824 
Protein GI219120159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGTG TCAATGGCCG GATTCGACGC GGTCGCCCTC GTGTGGTGGA ACCGATGTCG 
TCTTTCCGAG TGATTGCATT CAGCACTATG TCGTTTTTGG GGATCATCGC GATTTTGGTC
GTATTCACTC TTGTCCGAAA TTTCCACGGG GCGCCCATAA AGGCGGAAAG CAACTTCTTT
TCAGTGGCTG ACGAAATTCC GGACAGTGTC GTGTCCAGGC TGGATGTCAT TCTGGTTCTC
GGTGGCGGCG TCCCGTCGTC CCTGGATAGC CCACCGGTTT ACGTGCAACG CCGATGCGAC
GATGCGGCAG CCGTTGTCTC GAGACACCAA TTGCTGCCTG CTACATTCTC GAAAAAGTCC
ACAAAGCCCG TTTCGTCCAA GTCTCTTCCT ATTTTGTGTC TGTCGGCCGG TACGGCTCAT
TTACCTCAGT TGCTCAGCGC CAACGGTTTA CCCATTTGGG AATCGACTTC GTCGGCTGCA
TACTTGGAGC AGAAACACAA TATTCAAAAC GTGTTTGTGG AAACTACTTC ATACGACACT
ATCGGTAATG CTTTTTACGC AAGAACGAGT CACACTGATA TTGTTGGGTG GCGAAAGCTG
TTGGTTGTTA CCAACGAATT TCACATGGAT CGTTCCAAAG CTATTTTCGA GTGGATCTTT
GGAATTGACA GTGAGAAAAG AGCAGGCTAC GAGCTCTATT TTTTATCCTC TTTGGATGGT
GATCTTTCCG AGGAAGCGCT ACGGGCACGT CAAAATAAGG AAGCCAAAGG GCTGTCGTCG
GTTAGAAAAT ATTCTACGAA GTATCGAACT TTGTCTGATG TCTGGTCTTT TCTCAATAAC
GAACACGATC TGTACAAAGC CAGCAAGCTA GTGGAGCGTG GTCGTTCCAA TGCGTCGATA
AGCTTGGCTA CAGTGCTCGA GAAAGAGAGC TACGGGGCCC ACCGAAACCT TCACAGAAAC
ATTTTTGATC GCATATCATC ATCGATCCAT CGCCTAGTCG CCTGA
 
Protein sequence
MARVNGRIRR GRPRVVEPMS SFRVIAFSTM SFLGIIAILV VFTLVRNFHG APIKAESNFF 
SVADEIPDSV VSRLDVILVL GGGVPSSLDS PPVYVQRRCD DAAAVVSRHQ LLPATFSKKS
TKPVSSKSLP ILCLSAGTAH LPQLLSANGL PIWESTSSAA YLEQKHNIQN VFVETTSYDT
IGNAFYARTS HTDIVGWRKL LVVTNEFHMD RSKAIFEWIF GIDSEKRAGY ELYFLSSLDG
DLSEEALRAR QNKEAKGLSS VRKYSTKYRT LSDVWSFLNN EHDLYKASKL VERGRSNASI
SLATVLEKES YGAHRNLHRN IFDRISSSIH RLVA