Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_36405 |
Symbol | |
ID | 7201801 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 366186 |
End bp | 367363 |
Gene Length | 1178 bp |
Protein Length | 308 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180812 |
Protein GI | 219120134 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCCGC TTGAGCATGT CCTTGTTAAC CTTTTGGGTG CCACGTTATT GGACTTGCCC TATTGTTGTT TCTTTGCGGA GTACGGAATT ACTCAGGCTA GTGAGTTGAC TGCTATCAAT GAGACGCGCC TTGCAACCAT TTCATTTGGT GTTGTGACAC CAGTTGCTGG AGATGGTACA TCCACTACTG TTCGTACTTT CCTTCTGCCT GCCCAGCAGG GTTGGATCAC AAAGATCATC ACTTGGTTCC TTGCCCAAGG ACCCAATGTT ACAAATGCTA CCTGGTTTGT GTTGACACCA GCTATGCTTG AATACTAGCA ACCAGCATTG GTCCCTGTTG CATCAGCTGC CCCGGCTACA TCTGTTGTTG CCTCTGTTGC TAGGAGTACT CTGGAAAAGA GTTCTGCTGC AAAGTTTCGA AAAACCATTA AGAATCACTC TGTTGCATAC CCTTTGTTCA ATGAAGACCA TCTCTGGGTG ACTTGGAGTA CAAATATTTG TATCAAGCTC CGCATTCATG GTGTCCAGCT TGTTCTTGAT CATGATTATG TTCCTCAGAC TGATGAGGAA GTGGAGACCT TTTTGGAGAT GCAAAATTTT GTCTTTGGTA TATTCAGTGA TACCCTGTTG ACCTCTCATG CACGCGGTAT TCTACACATT GATGACTTGG ATGCTCAAGC TGTGACCTGG TTGCATCACA TGGCAAGGAT ATTAATGCGC AAATTATGGC TATGTCTATT GAGACAAAGT TGACCCTGTA CTCACTTGCA ACTTCAAGAG CCAAAACCTG TGTTGCTTTT CTCACAACTT GGTGTAACGT CATCTATGAC TTGGAGCACA TTACTGACTT TCAACTCCCT GATCATCAGA AAATTGTCTG TCTTAAGTCT GCTGTCCGTT TGCATCCGCA ATTGAAATTG TTCCTTGGCA ATGTCCAGCT TTACTCTTGT ACCCATGTGG GGAAGAGTGC CAATGATTCT GACTTTGAAT ATATTTATGA TCTGATGCTT GAGCATGCCA CTGATATTGA CCATACTGAT CTGGAAGATG GTAAGACTCC TGAATCTCAG GGCACTGTGG CTTTGAATGA CTGGGATGCC CCCTCTGTTG ATGAGGAGGA TGCCCTCTCT GCTGATGAAA AGGTGTCATT CCTACTGTGG ATTCACTCAA TGCCTTGA
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Protein sequence | MDPLEHVLVN LLGATLLDLP YCCFFAEYGI TQATLVPVAS AAPATSVVAS VARSTLEKSS AAKFRKTIKN HSVAYPLFNE DHLWVTWSTN ICIKLRIHGV QLVLDHDYVP QTDEEVETFL EMQNFVFGIF SDTLLTSHAR GILHIDDLDA QADINAQIMA MSIETKLTLY SLATSRAKTC VAFLTTWCNV IYDLEHITDF QLPDHQKIVC LKSAVRLHPQ LKLFLGNVQL YSCTHVGKSA NDSDFEYIYD LMLEHATDID HTDLEDGKTP ESQGTVALND WDAPSVDEED ALSADEKVSF LLWIHSMP
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