Gene PHATRDRAFT_36405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36405 
Symbol 
ID7201801 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp366186 
End bp367363 
Gene Length1178 bp 
Protein Length308 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180812 
Protein GI219120134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCGC TTGAGCATGT CCTTGTTAAC CTTTTGGGTG CCACGTTATT GGACTTGCCC 
TATTGTTGTT TCTTTGCGGA GTACGGAATT ACTCAGGCTA GTGAGTTGAC TGCTATCAAT
GAGACGCGCC TTGCAACCAT TTCATTTGGT GTTGTGACAC CAGTTGCTGG AGATGGTACA
TCCACTACTG TTCGTACTTT CCTTCTGCCT GCCCAGCAGG GTTGGATCAC AAAGATCATC
ACTTGGTTCC TTGCCCAAGG ACCCAATGTT ACAAATGCTA CCTGGTTTGT GTTGACACCA
GCTATGCTTG AATACTAGCA ACCAGCATTG GTCCCTGTTG CATCAGCTGC CCCGGCTACA
TCTGTTGTTG CCTCTGTTGC TAGGAGTACT CTGGAAAAGA GTTCTGCTGC AAAGTTTCGA
AAAACCATTA AGAATCACTC TGTTGCATAC CCTTTGTTCA ATGAAGACCA TCTCTGGGTG
ACTTGGAGTA CAAATATTTG TATCAAGCTC CGCATTCATG GTGTCCAGCT TGTTCTTGAT
CATGATTATG TTCCTCAGAC TGATGAGGAA GTGGAGACCT TTTTGGAGAT GCAAAATTTT
GTCTTTGGTA TATTCAGTGA TACCCTGTTG ACCTCTCATG CACGCGGTAT TCTACACATT
GATGACTTGG ATGCTCAAGC TGTGACCTGG TTGCATCACA TGGCAAGGAT ATTAATGCGC
AAATTATGGC TATGTCTATT GAGACAAAGT TGACCCTGTA CTCACTTGCA ACTTCAAGAG
CCAAAACCTG TGTTGCTTTT CTCACAACTT GGTGTAACGT CATCTATGAC TTGGAGCACA
TTACTGACTT TCAACTCCCT GATCATCAGA AAATTGTCTG TCTTAAGTCT GCTGTCCGTT
TGCATCCGCA ATTGAAATTG TTCCTTGGCA ATGTCCAGCT TTACTCTTGT ACCCATGTGG
GGAAGAGTGC CAATGATTCT GACTTTGAAT ATATTTATGA TCTGATGCTT GAGCATGCCA
CTGATATTGA CCATACTGAT CTGGAAGATG GTAAGACTCC TGAATCTCAG GGCACTGTGG
CTTTGAATGA CTGGGATGCC CCCTCTGTTG ATGAGGAGGA TGCCCTCTCT GCTGATGAAA
AGGTGTCATT CCTACTGTGG ATTCACTCAA TGCCTTGA
 
Protein sequence
MDPLEHVLVN LLGATLLDLP YCCFFAEYGI TQATLVPVAS AAPATSVVAS VARSTLEKSS 
AAKFRKTIKN HSVAYPLFNE DHLWVTWSTN ICIKLRIHGV QLVLDHDYVP QTDEEVETFL
EMQNFVFGIF SDTLLTSHAR GILHIDDLDA QADINAQIMA MSIETKLTLY SLATSRAKTC
VAFLTTWCNV IYDLEHITDF QLPDHQKIVC LKSAVRLHPQ LKLFLGNVQL YSCTHVGKSA
NDSDFEYIYD LMLEHATDID HTDLEDGKTP ESQGTVALND WDAPSVDEED ALSADEKVSF
LLWIHSMP