Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27956 |
Symbol | |
ID | 7201808 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 409415 |
End bp | 411722 |
Gene Length | 2308 bp |
Protein Length | 634 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180823 |
Protein GI | 219120157 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCCCATTCCC TTCGACAGTC CATTTTCTAT TAAACGCCGT CTTGTCCGTT CCACTGTGTG GTCCACACTG AGGCCCACCA TGAGGACGTC TCCAAGCTCT GCTACTACAA TGCTTCTGGC TAGACAGAGA CGAACAGCAG TGGCGCTTCT CGTGCTGTGT ATTGGCTCGC AGTCGGCAAC GGCCTTTTCC TCCGTTGCTT ACCCGTCGAG CCACCGATCG CGTGGAGATG CGTTCCGATC TAGTCCTCTA TCGATACAGG GACTGCGACA GAGTACCACC GCCACCGCCA TCAGCGGTAG TAGTAGTACA GAGGATACCC CGCCCGTATC CACGAATTAC CAAGCGCCGC AAATCGAAAT TGATCGCCGT CGGAATTTAG CCATTATTAG TCATCCCGAC TCCGGCAAAA CTACCATGAC GGAAAAGCTT TTGCTCTATG GCGGTGCCTT GCAGCAGGCT GGGGCCGTTC GTCAAAAGGC GGAACAGCGT GCGACCCAGT CCGACTTTAT GGAAATGGAG CAAGAGCGCG GCATTTCCAT TTCCAGTACC GTCATGAATT TCGAGTACCA AGACTTCGGC ATTCGACTCA TGGATACTCC GGGACATCAA GACTTTTCGG AAGACACGTA CCGCGCACTC GCCGCGGCGG ATAACGCGTA AGTACGGTTC GACGGGACGC ACGTCTGTGG CGTGCTCTTG TTTCTTTGTT GCCTGTGGTA CGCGGTGGAC TCACGTCTTT CGTGCATGCT TGGAAAATGT TCACACCCGT GGGGTGTGCC GCTTTGGTAT CTTTTTCTTG TCACGTACAG CTTAATGTTA CTGGATGCCG CCAAAGGATT GGAACCACAG ACCCGCAAAT TGTTCGAAGT CTGTCGGATG CGGCGATTGC CACTCTTTAC CTTTTGCAAC AAAATGGACC GACCGGCGCT CTCGCCGTAC GAAATCATGG ACCAAATTGA GGATGAATTT GGGTTGGAAA CGCATCCCAT TTTGTGGCCG ATTGGTGACG GCGATCGCTT TAAAGGGGTT CTGGACCGGA CCACCAACGT GGTGCACTTG TATCAAAAGG CAGAAAAACG AGGCGGCAAG GCGGGGGTAC AAGAAGTACC GCTAGAGGAT ACCGTAACGT TAAAAGCTAC TATTGACGAC GAAGAACTTT TCCACAAGCT GTTGGAAGAT GCCGAACTGT TGGAAGAATT AATTAATCCG TTGGATATGG AACGAGTCAT GAAAGGGGAA CAAAGTCCGC TCTTTTTTGG ATCGGCCATG ACCAACTTTG GCGTCCAACT TTTCCTGGAC AAGTTTTGTA GTATGGGAAC CAAGCCTATG GGACGAATGG CGGACACGAA AAGTGAGAAC GAGGAAGAGA TGATCGGCCC GAATCACGAA GAATTCACCG GATTTATTTT CAAAACGCAA GCCAACCTGG ATCCCAAGCA CCGTGATCGA TTGGCCTACG TACGGGTGGT GTCGGGTAGA TATGAAAAAG GAATGAAAGT ATCACATTCT CGCTCCAAGT CGGGTAAGAA GTACAATTTG GCCCAAGCAC AGGCTCTATT CGGTTCGGAT CGTAGCTCGA TCGAAGTGGC CTATCCCGGC GATGTAATTG GAATTAATAA TCCTGGAAAC TTTGCCATTG GCGACACACT GTTTACGGGG GGCGCCCGGG TCGCTTTTCC GGGCATTCCG TCGTTCTCTC CGGAGAAATT TGCCTACATT CGAAGTCCAA ACCCGTCCGA CTACAAGTCC TTCCGGAAAG GCATCGATCA ACTACTTGAC GAAGGGGCTG TGCAAGCCTT ACGTCAACGA AACGACGATG GAGGTGGTCC CTTGATGCTA GCAGCTGTGG GTCAGCTCCA GTTCGAAGTT GTACAGGCAC GACTCAAGAA CGAATACAAC GTGGAATCGA TCATGGAGCC GTTAAACTAC TCACTTGCTC GTTGGGTGGA TGGTGGCTGG GAAGCCGTCG AGAAGGCAGA CGCCGATGGC AAGCTCTTTG GGATCATGAT TTGTCAAGAT CGTTGGGGAA GACCGGTGCT TCTCTTTCGC AATGATTGGA AGGCGGCGTC GGTAGCCGAG GAAGAAAAGT ACCTAGACTT GAAACCATGG TCTACACCGC CGATTATTGA TGAGTGATAG ATGTCGACTC CCTACAATCA TATTTGAACT CGATAAATAG TTATCGTTTT CATTCAAAAA AAGAGGCGGT AAACAGCGTT TTCAACAGTC AAGAGACGTC GATTCGAAGC AGCTTCACAT TTACATTAAA ACCAATCGAA AATGTGAGAG ATACGCTAAT ATTGGATT
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Protein sequence | MRTSPSSATT MLLARQRRTA VALLVLCIGS QSATAFSSVA YPSSHRSRGD AFRSSPLSIQ GLRQSTTATA ISGSSSTEDT PPVSTNYQAP QIEIDRRRNL AIISHPDSGK TTMTEKLLLY GGALQQAGAV RQKAEQRATQ SDFMEMEQER GISISSTVMN FEYQDFGIRL MDTPGHQDFS EDTYRALAAA DNALMLLDAA KGLEPQTRKL FEVCRMRRLP LFTFCNKMDR PALSPYEIMD QIEDEFGLET HPILWPIGDG DRFKGVLDRT TNVVHLYQKA EKRGGKAGVQ EVPLEDTVTL KATIDDEELF HKLLEDAELL EELINPLDME RVMKGEQSPL FFGSAMTNFG VQLFLDKFCS MGTKPMGRMA DTKSENEEEM IGPNHEEFTG FIFKTQANLD PKHRDRLAYV RVVSGRYEKG MKVSHSRSKS GKKYNLAQAQ ALFGSDRSSI EVAYPGDVIG INNPGNFAIG DTLFTGGARV AFPGIPSFSP EKFAYIRSPN PSDYKSFRKG IDQLLDEGAV QALRQRNDDG GGPLMLAAVG QLQFEVVQAR LKNEYNVESI MEPLNYSLAR WVDGGWEAVE KADADGKLFG IMICQDRWGR PVLLFRNDWK AASVAEEEKY LDLKPWSTPP IIDE
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