| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_27877 |
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| Symbol | |
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| ID | 7201627 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | - |
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| Start bp | 106019 |
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| End bp | 108553 |
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| Gene Length | 2535 bp |
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| Protein Length | 521 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180943 |
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| Protein GI | 219120408 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGACCCGTAG AGTTGTTCTC TCCTCTGTGA CACACTCATC CTCTCAGCAT TCACCATGTC
TTTTGATTTG GACGCATTCT GCACTGGCCT GACAGCCGCG TCGAGCTCTT CTGAGCAGGC
TGTGTGCGCT CTGCAAACGG TAAGTCGCGG CAAAACTTCT GACATGCTCC TATCTTGGCA
CTGCAATGAG AAAGATGGAC CTGGCTACTA TCCGATACCG TAATGCTACA TTCATGCAGT
CTACTCTTTG CAGCAACCCT TCCAGTTATT GTCCTGAGCA TCCGCCTCGG ACTCCTAAGC
GGAATAAGCG GGGTTGATCT ACACGTTGGT CGGTCTGTCT TTGACTGCGA TGCGTCGTCG
ATAATTTTGA TCAAAGGCTT GTTGTTTAAA TTTGCTTGTG TGCCACCTAT ACTCACTTGG
ATGCCTTTTT GTTTGCACTC TACTTCTGCA GATCGTGGCC GGAGTTTCTA AGACTGTCGG
AGGTATTGAC GCGGAAGGGA TTACTGCAGG TGTTGATACT TTCTTCCTCA TTTTTGCGGT
ACGTATTTTG AATTACCCAC TGGCATTTCG ACCCTGCAAA TGTATTTGTT CGTTCGATCT
TTGAGGCCGC TTGTGAAGAT TTTCGTCTTC CATCATGATG AGAAAGAGTT TTTCTTTCAT
TCGATGTGAG AAAAAGGATC CCACGTCGAC TATGTATTGG TACCTCGTGT ATAGTGAGAA
GTTCGATCGT TCTTGACAAG TTCCGATCTA CTTTGCGGAA GTTTTGGGCT CATGTGACAT
TGTTGTGTTC GACGGGCGTG GAAGGTATCG AGTTCGCGAT GTTACTTAAC AACTTGTGAC
GCAACTCGTC TTTTTTGACA CAAAGTTCTT TAAGTCCGCA ATGTCTTGGC GTATGCCGTT
ACGAACTTCC GTTTCTGACG CGATTGCCTT CTCGTCCAAT CACTACAGGG TGCCTTGGTC
TTCATGATGC AGGCCGGGTT CGCCATGCTT TGTGCTGGAT CCGTCCGTCA AAAGAATGTA
AAGAATATTA TGCTCAAGAA CTTGTTGGAT GCCTGTGGTG GTGCTATTGG CTTCTACACC
GTTGGTTTCG GCTTCGCTTA TGGCGGTGAC GACACCACCG ACAAGACCTT CATTGGCAAC
AGCTACTTCG CGCTCCGTGA TTACACAAAT TATGCAGGTT TCTTCTTCCA GTTTGCGTTT
GCTGCCACTG CCGCCACGAT TGTTGCCGGT ACAGTTGCTG AGCGATGCAA GATGTCGGCA
TACCTTTGCT ACTCTCTCTT TCTTACGGGT TTCGTCTATC CCGTCGTTGT ACGCTCTGTC
TGGAGCTCCA ACGGGTTCTT GTCAGCCTTC AGTGCCGACC CCTTCCAAGG AGTTGGAACC
GTTGACTTTG CCGGATCAGG TGTGGTGCAC ATGACTGGAG GACTCACCGC CTTGATTGCT
GCCATTGTTC TTGGACCGCG TAAGGGTCGG TTCTACGATG AGGATGGCAA CCCTCTGGAG
ACGCCCGCCA GCTTCCCAGC CCACTCTGTA GCCCTCCAGA TCCTCGGAAC TTTCATCTTG
TGGTTCGGAT GGTACGGATT CAACCCTGGT TCAGCCCTGA AGATTGCTAA CGCCGATTCG
GCCGCAACCG CCGCTTTGTG TGCCGTCACC ACCACTATGG CCGCCGCTGC CGGTTGTGTT
TCCGCCATGT TCACTGACTC GATCATTGAC GGCATGGCGA CCGGTGAAAC TACGTACGAT
CTGACCATGG CCATGAATGG ATGCCTTGCT GGTCTCGTTG CCGTCACTGC TGGTACATCT
GTCGTCACCC CATGGGCCGC AATCATTATT GGAGTCGTTG GAGGTTGGGT CTACATTGGT
ATGTCCAAGC TTTTGATCAA GCTCAAGATT GATGACGCTG TCGATGCCAT CCCTGTCCAT
TTCGCCAATG GTTTCTGGGG TGTCCTAGCC ACCGGCCTTT TCGCCAACGG TGGATTGATG
GCAACCGCTG GGTACAACTC GGAACACGAG GGCTGGTTCT ACGAATGGGG AAGTGGCTCC
GGAGATGGAA GTCTTCTCAT CTGCCAGCTT GCTTGCCTCG CCTGGATTAT TGGATGGGTC
ACCACCATTA TGACGCCCTT TTTTATCCTT TTGAACATGG CCGGTATGTT CCGTGTGGAC
CCGCTTGAGG AAGAAGTTGG TCTTGATATT TCCCATCACC GTGGATCTGC TTACGATCTT
TCGGGACCCA GCAAGGACCA TGTTGACGAG CTCATGGAAA TTCGTGCCTC GAAGCACGGC
AAGGTTGAGG TTCCAAAGGA GGTTGCGCAG GCTGCTGATG ACGCCGCCGA AGAGACTGCT
TAAACGGTTT AATTGCTGCT CGTGTGGGCT TTCAGCCCAT CTGATTCATG TTTATATCGT
TTCTTTGGTG TAGCGGCTTT GAATTTTTGG TTTTGGGATA GACGATGGGA CAGTTTTAGT
TTGTTTTTCC AGGTTTTTGA TCATATGTCT ATTTCTCCCC TAAACAGTAT TTAAAGTCCG
GTTTGTCGAT ACCTT
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| Protein sequence | MSFDLDAFCT GLTAASSSSE QAVCALQTIV AGVSKTVGGI DAEGITAGVD TFFLIFAGAL
VFMMQAGFAM LCAGSVRQKN VKNIMLKNLL DACGGAIGFY TVGFGFAYGG DDTTDKTFIG
NSYFALRDYT NYAGFFFQFA FAATAATIVA GTVAERCKMS AYLCYSLFLT GFVYPVVVRS
VWSSNGFLSA FSADPFQGVG TVDFAGSGVV HMTGGLTALI AAIVLGPRKG RFYDEDGNPL
ETPASFPAHS VALQILGTFI LWFGWYGFNP GSALKIANAD SAATAALCAV TTTMAAAAGC
VSAMFTDSII DGMATGETTY DLTMAMNGCL AGLVAVTAGT SVVTPWAAII IGVVGGWVYI
GMSKLLIKLK IDDAVDAIPV HFANGFWGVL ATGLFANGGL MATAGYNSEH EGWFYEWGSG
SGDGSLLICQ LACLAWIIGW VTTIMTPFFI LLNMAGMFRV DPLEEEVGLD ISHHRGSAYD
LSGPSKDHVD ELMEIRASKH GKVEVPKEVA QAADDAAEET A
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