Gene PHATRDRAFT_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_1469 
Symbol 
ID7201550 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp374026 
End bp375186 
Gene Length1161 bp 
Protein Length354 aa 
Translation table 
GC content46% 
IMG OID 
Product2-hydroxyacid dehydrogenase 
Protein accessionXP_002180815 
Protein GI219120140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GATCTTGAGT ATTTTTACCT GCCAATCATT TTCAAATCAC ATGTCACGGG GTTCGAGCCG 
ACGAAGGATT TATTTTTGGA ACAAGGGAAT ATTGTTGCAG GCCAGTATCT TGTGGAAGGT
GAACTTGGAA GCGCGGCTTT CAGTACGGCC TACCGATGCA CTGACTTGAA TTCTGATCAA
GATAGCGACG GCGAACACGA AGAAGTTTGC CTGAAAGTGA TCAAGAACAC AAAGGATTTT
TTTGACCAAT CGTTGGACGA AATCAAAATA TTGGAATTAT TGCGACAGAC TGGAAAGTGC
AATGAGAATC ATCTTATCGA GATGAAGACA TTTTTCTACC ACAGAGAGCA TCTTATCATT
GTGACAGAAC TTCTTCGACA AAATCTCTTC GAGTTCGGCA AGTTCATTAT TGAGGACAAC
GAAGAGCCGT ACTTCACCAT GAATCGACTT GCCTACATCA CTCGGCAATG TCTTACTGCT
CTACGCTTCG TTCATAATCT TGGCCTAGTT CACTCAGATG TGAAGCCGGA AAATATCCTT
CTGGCAAGCT ACAGCCGCGC GCAGATTAAG CTGATCGATT TTGGAAGTTC ATGCTACCTC
ACGGATCGGC AATCGTCATA TATACAATCG AGGTCCTACC GCGCACCCGA AGTGGTGCTG
GGCCTACCCT ACGATGGACG CATCGACATT TGGTCGTTGG GCTGTGTTGT TGCTGAAATG
TACACGGGGG AGGTGACCTT CCAGAATGAC TCGATCGTTT CCATGTTGAG TCGAATTGAA
GCTATATGCG GCGCATTTCC CTACCATATG ATTGTACAGG GACGGCAAAG CGAAAATTTC
TTTACCAAGC GTGGTCTTTT ATTTGAAAGT CTCAGCGAGG AAGAAGAAAC AAATAATGAT
AGCCACCATT CGGACAAGGG CGAGCAAAAC GTTGGCCGCA AGATCGACAT ATTCCAGCCC
AAAGCGACTA CTTTGGCCTC GCGTCTGGGA TTCACGTCCG ATTTATTGGA AAAGCTCGAT
AACGGCAAGA CGCTGTCCAA AGACCTGACT CGACAAGCCA TGTTTGTAGA TTTTGTTCGA
AAACTTCTAA CGATCGACCC CGAAGTTCGT CCAACAGCTG GTCAGGCTTT GGAGCACCCT
TGGATGAAAT ATGCTTCAGC A
 
Protein sequence
DLEYFYLPII FKSHVTGFEP TKDLFLEQGN IVAGQYLVEG ELGSAAFSTA YRCTDLNSDQ 
DSDGEHEEVC LKVIKNTKDF FDQSLDEIKI LELLRQTGKC NENHLIEMKT FFYHREHLII
VTELLRQNLF EFGKFIIEDN EEPYFTMNRL AYITRQCLTA LRFVHNLGLV HSDVKPENIL
LASYSRAQIK LIDFGSSCYL TDRQSSYIQS RSYRAPEVVL GLPYDGRIDI WSLGCVVAEM
YTGEVTFQND SIVSMLSRIE AICGAFPYHM IVQGRQSENF FTKRGLLFES LSEEEETNND
SHHSDKGEQN TLSKDLTRQA MFVDFVRKLL TIDPEVRPTA GQALEHPWMK YASA