Gene PHATRDRAFT_12972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12972 
Symbol 
ID7201899 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp89343 
End bp90249 
Gene Length907 bp 
Protein Length247 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180941 
Protein GI219120404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGA CGACGACGTT ACCCGAGACG CCATCGTGGG GAGTGGGTTG GACCCAGAAC 
GACATGATGG AGAAAGATAC CGTCTTGGTC TTGGACGAAC GAGACAACGT CATTGGATCG
GCATCCAAAA AGACGTCGCA CGTCTTCAAC GCACAACAAC CCCACGGTAT TCTCCACCGA
GCCTTTTCCG TCTTTGTCTT TGAACGACAA TCCTCACGGA TGCTGCTCCA ACAACGAGCC
CATTCCAAAA TTACCTTTCC CAACGTACGT ACGCGTGTGT GTGTGTATAT GGATTGGTAT
ACATATATGT ATGCGTGTGT GTTTTTTGTA ATATTATTGT GTTGTTGTCC TGTTGTTGCC
GTGGTGTCTC GCTACGACGC TCCCTCTCCA ACGTACCAGT TCCTGCACTG ACTTCCATTT
CAACCCGCAG GTGTGGACGA ATACGTGTTG TTCGCATCCG TTGCACGGCA TGGATCCCAA
CGAGGTCGAC ACGCCGGCGG ACGTGGCCGA CGGATCCGTG CGGGGCGTCA AGCACGCCGC
GATGCGCAAA CTGCAACACG AGCTCGGGAT CGACCCCGCC CTCCTCGACC TCCACGGCTT
TCGTTTCCTC ACGCGACTGC ATTACTGGGC CGCCGACACC GTCACGCACG GACCCGACGC
GCCCTGGGGA GAACACGAAA TCGATTACGT TCTCTTTTAC GTCGTCGACA AGATCGAGGC
CTTGCCGCTA CTACCGCATC CCGAGGAAGT CGACGATACC CGATGGGTCA CGCTCCAAGA
ACTACAAACC ATGATGCGGG ACGATAACCT CCTCTTTTCT CCCTGGTTCC GTCTCATTGT
CGAAAAATGG CTCGAAACCT GGTGGCAGAA TCTTGACGTT TGCATGCGGC CCGATCCCCA
ACAGAAC
 
Protein sequence
MTTTTTLPET PSWGVGWTQN DMMEKDTVLV LDERDNVIGS ASKKTSHVFN AQQPHGILHR 
AFSVFVFERQ SSRMLLQQRA HSKITFPNVW TNTCCSHPLH GMDPNEVDTP ADVADGSVRG
VKHAAMRKLQ HELGIDPALL DLHGFRFLTR LHYWAADTVT HGPDAPWGEH EIDYVLFYVV
DKIEALPLLP HPEEVDDTRW VTLQELQTMM RDDNLLFSPW FRLIVEKWLE TWWQNLDVCM
RPDPQQN