Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12972 |
Symbol | |
ID | 7201899 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 89343 |
End bp | 90249 |
Gene Length | 907 bp |
Protein Length | 247 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180941 |
Protein GI | 219120404 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGACGA CGACGACGTT ACCCGAGACG CCATCGTGGG GAGTGGGTTG GACCCAGAAC GACATGATGG AGAAAGATAC CGTCTTGGTC TTGGACGAAC GAGACAACGT CATTGGATCG GCATCCAAAA AGACGTCGCA CGTCTTCAAC GCACAACAAC CCCACGGTAT TCTCCACCGA GCCTTTTCCG TCTTTGTCTT TGAACGACAA TCCTCACGGA TGCTGCTCCA ACAACGAGCC CATTCCAAAA TTACCTTTCC CAACGTACGT ACGCGTGTGT GTGTGTATAT GGATTGGTAT ACATATATGT ATGCGTGTGT GTTTTTTGTA ATATTATTGT GTTGTTGTCC TGTTGTTGCC GTGGTGTCTC GCTACGACGC TCCCTCTCCA ACGTACCAGT TCCTGCACTG ACTTCCATTT CAACCCGCAG GTGTGGACGA ATACGTGTTG TTCGCATCCG TTGCACGGCA TGGATCCCAA CGAGGTCGAC ACGCCGGCGG ACGTGGCCGA CGGATCCGTG CGGGGCGTCA AGCACGCCGC GATGCGCAAA CTGCAACACG AGCTCGGGAT CGACCCCGCC CTCCTCGACC TCCACGGCTT TCGTTTCCTC ACGCGACTGC ATTACTGGGC CGCCGACACC GTCACGCACG GACCCGACGC GCCCTGGGGA GAACACGAAA TCGATTACGT TCTCTTTTAC GTCGTCGACA AGATCGAGGC CTTGCCGCTA CTACCGCATC CCGAGGAAGT CGACGATACC CGATGGGTCA CGCTCCAAGA ACTACAAACC ATGATGCGGG ACGATAACCT CCTCTTTTCT CCCTGGTTCC GTCTCATTGT CGAAAAATGG CTCGAAACCT GGTGGCAGAA TCTTGACGTT TGCATGCGGC CCGATCCCCA ACAGAAC
|
Protein sequence | MTTTTTLPET PSWGVGWTQN DMMEKDTVLV LDERDNVIGS ASKKTSHVFN AQQPHGILHR AFSVFVFERQ SSRMLLQQRA HSKITFPNVW TNTCCSHPLH GMDPNEVDTP ADVADGSVRG VKHAAMRKLQ HELGIDPALL DLHGFRFLTR LHYWAADTVT HGPDAPWGEH EIDYVLFYVV DKIEALPLLP HPEEVDDTRW VTLQELQTMM RDDNLLFSPW FRLIVEKWLE TWWQNLDVCM RPDPQQN
|
| |