Gene PHATRDRAFT_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_1196 
Symbol 
ID7201666 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp293811 
End bp294916 
Gene Length1106 bp 
Protein Length304 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180979 
Protein GI219120483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.51359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGATCTTTGC CTTCAGAGAT TGGACGTCTT ACTAAACTCG AAAACTTTAT CATAAAAAAC 
GAGCGTGGCT TATCAGGAAC CTTACCGTCC ACGATTGGTA ACATTATTTC TTTAAAGCAG
CTGGGCCTTT ACTATAACGC CCTTACAGGA ACAATTCCGG TGGATCTATT CCGGGCAACA
AATCTCCGAT ACGTTAATCT CGAACATAAC AAGCTGAAGG GTACACTCCC AAGACAAGTT
GAACTCCTAA AGCGTCTGGA AACATTGGTC ATCTCCAATA ACAACTTTGA AGGAGAGCTT
CCTTGGGAAG GTCTGGTAAC CAATCCGATC AAATACGTGA GTTTCAGCGA AAACGAATTT
TCTGGATCTT TGCCTAAGCT TAGTGGTTTC CCCGACTTGC GCTTTCTCTA TATGGAAGGA
AATCGCTTCA CAGGGACTGT TCCAGCAGCG ATCGCAGATT CTACCAATCT CAAATCAGTC
AATTTGGACC GAAACAGTTT CTCCGGTACT GTGCCGTCTT GGATTGGACA TTTGAGCCAT
CTTGAGTACA TTTCCATGCA GTCGAATCTT CTAAGTGGGC CGCTCCCTCA TGAGATATTT
GATATGACTT CTTTGATCAC ATTAAGTCTG TCCTCAAACA AGATCTCTGG AACACTTCCT
GATTTGGAAA GACTGAATTC GCTCAGATTT CTCTACCTTC ACCAGAATGC TCTGACTGGA
TCGGTGCCGA ACAGTGCTTT TACGCACGAG TCTTTAGGTA AGAAGCCCAA TCTTTGATGC
TGTATCGCAG TCAGGCTTTC AAACTCACTC AAACTCTATT AGAGATCTTG TTTTTAAGCG
GGAATAAGTT TCAGGGTATT CCGTTCACGG TTAGTTCCAC CAATGTGCTG CATGGGCTGT
ATTTGTCCAG CAACAAGCTC GTGGGTCCTT TGCCGAGCAC CCTTTGTGAG ATGAAGAAGC
TTGAAGCATT ATTTCTGGAT GATAACGAAT TTTCTGGAGA GATTCCTGCG TGCATTGGTG
GTCTGAGCAG CCTTCAGCAG TTGTTTCTCT TCAAAAACAA AATAGTAGGT CAAATTCCGC
CTGAACTCAG CTTGCTCAGA CTTTTG
 
Protein sequence
GSLPSEIGRL TKLENFIIKN ERGLSGTLPS TIGNIISLKQ LGLYYNALTG TIPVDLFRAT 
NLRYVNLEHN KLKGTLPRQV ELLKRLETLV ISNNNFEGEL PWEGLVTNPI KYVSFSENEF
SGSLPKLSGF PDLRFLYMEG NRFTGTVPAA IADSTNLKSV NLDRNSFSGT VPSWIGHLSH
LEYISMQSNL LSGPLPHEIF DMTSLITLSL SSNKISGTLP DLERLNSLRF LYLHQNALTG
SLVGPLPSTL CEMKKLEALF LDDNEFSGEI PACIGGLSSL QQLFLFKNKI VGQIPPELSL
LRLL