Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_1196 |
Symbol | |
ID | 7201666 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 293811 |
End bp | 294916 |
Gene Length | 1106 bp |
Protein Length | 304 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180979 |
Protein GI | 219120483 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.51359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGATCTTTGC CTTCAGAGAT TGGACGTCTT ACTAAACTCG AAAACTTTAT CATAAAAAAC GAGCGTGGCT TATCAGGAAC CTTACCGTCC ACGATTGGTA ACATTATTTC TTTAAAGCAG CTGGGCCTTT ACTATAACGC CCTTACAGGA ACAATTCCGG TGGATCTATT CCGGGCAACA AATCTCCGAT ACGTTAATCT CGAACATAAC AAGCTGAAGG GTACACTCCC AAGACAAGTT GAACTCCTAA AGCGTCTGGA AACATTGGTC ATCTCCAATA ACAACTTTGA AGGAGAGCTT CCTTGGGAAG GTCTGGTAAC CAATCCGATC AAATACGTGA GTTTCAGCGA AAACGAATTT TCTGGATCTT TGCCTAAGCT TAGTGGTTTC CCCGACTTGC GCTTTCTCTA TATGGAAGGA AATCGCTTCA CAGGGACTGT TCCAGCAGCG ATCGCAGATT CTACCAATCT CAAATCAGTC AATTTGGACC GAAACAGTTT CTCCGGTACT GTGCCGTCTT GGATTGGACA TTTGAGCCAT CTTGAGTACA TTTCCATGCA GTCGAATCTT CTAAGTGGGC CGCTCCCTCA TGAGATATTT GATATGACTT CTTTGATCAC ATTAAGTCTG TCCTCAAACA AGATCTCTGG AACACTTCCT GATTTGGAAA GACTGAATTC GCTCAGATTT CTCTACCTTC ACCAGAATGC TCTGACTGGA TCGGTGCCGA ACAGTGCTTT TACGCACGAG TCTTTAGGTA AGAAGCCCAA TCTTTGATGC TGTATCGCAG TCAGGCTTTC AAACTCACTC AAACTCTATT AGAGATCTTG TTTTTAAGCG GGAATAAGTT TCAGGGTATT CCGTTCACGG TTAGTTCCAC CAATGTGCTG CATGGGCTGT ATTTGTCCAG CAACAAGCTC GTGGGTCCTT TGCCGAGCAC CCTTTGTGAG ATGAAGAAGC TTGAAGCATT ATTTCTGGAT GATAACGAAT TTTCTGGAGA GATTCCTGCG TGCATTGGTG GTCTGAGCAG CCTTCAGCAG TTGTTTCTCT TCAAAAACAA AATAGTAGGT CAAATTCCGC CTGAACTCAG CTTGCTCAGA CTTTTG
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Protein sequence | GSLPSEIGRL TKLENFIIKN ERGLSGTLPS TIGNIISLKQ LGLYYNALTG TIPVDLFRAT NLRYVNLEHN KLKGTLPRQV ELLKRLETLV ISNNNFEGEL PWEGLVTNPI KYVSFSENEF SGSLPKLSGF PDLRFLYMEG NRFTGTVPAA IADSTNLKSV NLDRNSFSGT VPSWIGHLSH LEYISMQSNL LSGPLPHEIF DMTSLITLSL SSNKISGTLP DLERLNSLRF LYLHQNALTG SLVGPLPSTL CEMKKLEALF LDDNEFSGEI PACIGGLSSL QQLFLFKNKI VGQIPPELSL LRLL
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