Gene PHATRDRAFT_5738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5738 
Symbol 
ID7201460 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp729853 
End bp730716 
Gene Length864 bp 
Protein Length247 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180699 
Protein GI219119896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GATGCCCTCG TTGTCCTAGA CGTGACACAC TCCAACCTCG AACAACGCCA CGCCGAGCTA 
CGGTTCGCCA AACATGATAG CCTGGAGACG TTACGGACGC GCATTCACCA AAAGACCGGC
ACATCGGCTC AATTTCAGCA CTTGCTCGTT TACGACAACC ACGACGATAA CAGTTTACTG
CACGAGATAC CACCCGAAAC CTCGGACGAC ATCAAACTGG GCTATTTCGG TATCCTACAC
CACGGAATGC GGGTGCACTG CGTAGACCTC AATCCTCACT CGGGCTCTGC CGGAGGCGCT
TACGAAGATG TTTCGTTAGT GGAGAAATAT CGCATGACGG AGGATGAATA CGATGCCCGT
AAAGGTACGC TACGAGATTG GGGACGCCAG CAGCGAGAGC GTCAACCTGA CTTCAACTTG
CGAAAGCACG CGGCAACGCA CCGAGCCTTA ACCGAAGCGA AGCGTTTGCA CAAACAACAC
TTGCCGTTAC CGGAAGGCTT CATCGTAGAC TCAACGGGAA AAGTTGTTGT GGACGAACCC
GATGTGGTGG CACCCATCAA AATGTCAGAA ATGGTTGGAT CAGATGAGTA CGGACTGGAC
TCGGTAGCTC ACTGTCAGGT TGGGCAACGC TGTCAGGTAG AGCCGGGTCA GAGGAGGGGC
GAAATAGCTT TTATTGGAAA ACTTTCTCAG GAAAAGCCGG GCCACTGGGT TGGTGTTCGC
TTCGACGAAC CAGTCGGTCA GAATAACGGA GTGGACAACG GTGTTGTGTT TTTCGAAGCA
ATGGATCGAT ACGGTGCGTT TGTTCGTGGT AAAAAAGTTG TAACCGGAGA CTTTCCAGAG
CGCGACATCT TCGATAGTGA TGAC
 
Protein sequence
DALVVLDVTH SNLEQRHAEL RFAKHDSLET LRTRIHQKTG TSAQFQHLLV YDNHDDNSLL 
HEIPPETSDD IKLGYFGILH HGMRVHCVDL NPHSGSAGGA YEDVSLVEKY RMTEDEYDAR
KGTLRDWGRQ QRELVVDEPD VVAPIKMSEM VGSDEYGLDS VAHCQVGQRC QVEPGQRRGE
IAFIGKLSQE KPGHWVGVRF DEPVGQNNGV DNGVVFFEAM DRYGAFVRGK KVVTGDFPER
DIFDSDD