| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54536 |
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| Symbol | |
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| ID | 7201272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | - |
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| Start bp | 564266 |
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| End bp | 567149 |
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| Gene Length | 2884 bp |
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| Protein Length | 859 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180669 |
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| Protein GI | 219119835 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.253785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTATTTCAAG CGTTCCCTTT ATTGATTCGT GTACCGTTGT GTGAAAACAT ACACAAGACA
CGAGCGAACA CGCTCATAGT CGCTCACTTT CATCTACAGC TACCTACCTA GCTAGGTAGA
GAGCTTGGTG ACGATGATGA ATGGACGTCG TGGATACACC GAAATTGCGG CCGGCGAGAC
CGAACCCTTG CGGGAGACTT CCACTTCCAT GATTTCCCCG TCTCGCACAA CGGATCCGTC
TCCCCGGGGA CGAAATTTGG TCTGTGCATT GGTGACGGTT GGTGTCCTCC TGGGAACCAC
TTTGGGATGG ACCCGCGTTC CGGAAGACCT CGACTCTAGC GTCCCCGTCG GAGTGCCCGA
TTCACAGGAT CCCACGGCCG CCTCCTCCAC GGACCGTTCC ATCCGGTACC GTCCGCTTTG
TCAGTTTTAC GACGACACGT CTACTTCCGT ACGCATGATT CAAACTTCCC TCAAGGAACC
GTCGCGGCAG TGGTCCGATC AGCCATGTTT CCCGGCATCC CGGCACACTA CATTGTTTAC
CAACCAGCGT GGGCGTCCGC CGGTTTTGCC CTTGGACGCC TACGGCTCTC CCGACGCAAT
ACTACGTGTC AACTTTTCCG CGGTTGCATT TCCCACACAC CAGACGCCCA TCCTAGGATT
CGGTGGCGCC TTTACCGAAG CCTCCGGGCG GAATTATCAA CGCCTTTCCG AACAGGGCAA
GCAGGCCGTC ATGGAACTGT TGTTCGGGGC GCAAGGACTG GGATACGCAT TGGGACGGGT
CCACATCAAT TCGTGTGATT TCTCCGTCAA AAGCTACACC TTTGACGATG TCGAGGACGA
TTTCCCCCTC GACCACTTTG ACGTTGGTGT CCACCACGAC GTCGAAGTGG GTATGGTGGA
TATGGCCTTG CGCGCCACGT CAATCTTGCG TCAAGGCTGG CCGAGTGAGG ACGCCTACGA
AGGAAATTTG CGACTCTACG CTAGTCCCTG GTCACCGCCG GCTTGGATGA AAAAACCGAC
ATGGGAGGAC GCCAAGAACG CCACGCACGC CGCAAAAATG ACCTACAGCG CCGAACCCAC
CTGTCTGCGC GAGGGCGTCG GTTCCCAATC CCGCTACGCC GCTTCCTGGG CCCTCTATTT
CTCCAAATTT GTCACTGCCT ACCGAGACTT GGGATTGCCG CTCTGGGGCG TGACGGTACA
GAACGAACCG GAATTCGCCG CACCATGGGA AGCGTGTGCC TACACACCGA CCACCCAGCA
CGATTTTCTC ACCAACCATT TGGGTCCACA ACTTGAACGA GATCATCCCG ATCTGAAGAT
ATTCATGTTT GATCACAACA AGGATCACAT CAATATTTGG GGGCAGAAAA TGCTCAACGC
GTCGAGCAAT GCGTCCCGTT ATGTGGACGG GACCGCCTAC CACTGGTACG CTGGAGGTAT
GGACCGTCTC CTCGACGGTG CTCTGGGTAA CGCCAATCTA CACCAGTTTC AAGAGGACAT
GCAAACCTAC GGGATCCAAT CAAACCACAT TCTCTTCAAT TCCGAAGCGT GCCACTGCCC
AACCACTGGC TACGCCGGTG GCGACATTAA CATTTACTGG GCGCGGGCGG AGCGCTACGC
CCACACGATA CTGGCCGACC TGGCGGCTGG TAGTCATGGT TGGGTGGAAT GGAATCTACT
CCTCGACAGT ATCGGCGGAC CTAATCATCT AGGGAACTTG TGTGAGTCGT CCCTTCTGGC
CGTCCCCCAC CGCGCTTTGA ACGCAGATCC CCATACACCA CCTCTGCCCG ACTTTGAAAC
CGACGGGCCT ATGGGCAAGG TGAATATCGG AGACGGTAGG ACTCGGGAAG AACTCAACGC
TCTTGGTTTT CCCGCCAAGT TTCTAGACGT TGGCGTTGCC GTTCAGCCAA TTTACTACTA
CATGGGACAC ATCTCGCGCT ACGTTCGACC GGGATCGGTA GCGGTGCCCG GGCTCGTCAC
GGCCAACGCG CAACCTGGCG TCCGGATATT CCGGCCATCC GGGCAAGTGG TGGTCGGCGG
CGGGGAGAAC GATTTGGCTC GGCACGGTAT GGAGATTACG GCCTGGCCGT GTGAAGGGTC
CACCCGACAG CACTTTACCT GGAACGCCGA TTCGAAGCGA CATATTCAGG TACAAGGGCA
CGACTGGCTT GGGAATCCAA CCAAGTCCTG TTTTGCCCGT AAATCCGACC CCTCGCTGGG
CACGATGAGT TTGACGGATT GCAAACCGGG ACAAGTGGGA ATCTACGATA TTGTTCCAAT
CGCGGAGAAG GAAGGCGATC AAAGATTCTT CCAAATTGTT TTGACGAATC ATCCCAAACT
CGATCGACCC TGTTTGATCA TCCACCAATT GGGCAATGAC GGCGGAGCTT ATGGTCCCCG
AGGTGGGGCT CCCGTCACCT TGGGTAGCTG TTCATCGAAA GCAGCCAGGT GGAAAGTGGA
CGAGACAACA GGCGAAGCCT CGTCTACCTT CTTCTCGGAC GATGACGGCA ACGAAAATGA
GGTGTGCATG ACCACAGGTT GGCCCTTTCT ACAAATGGGA GCTTTCTTAA CGCCAAACGG
GGAAGTGCCT AAGACGGTAG TGATTCTCAA CGAAGCCAAA GAATCGGCCA ATTTTGCTAT
TCAAGATCAA GATAAGGTTA TCGTCACAGC TTCTATTCCT CCGCGATCCA TCCAGACTAT
CCTTTTGCAG TAAAGTTGCA TTGCATGCAG ATTATTTTGG TCGATTGACG AAGACCAAAG
TATTGGAGCA CTTTATAGTT AGAAAGGAAA GCAGGTCTTG GTCTAAAATG CGACAATGTA
CAACGTCTAA GTACACTAGA GCACCTATTC TATTTCATTG TAAGAAACGA AGTGTCAAGA
TTGC
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| Protein sequence | MMNGRRGYTE IAAGETEPLR ETSTSMISPS RTTDPSPRGR NLVCALVTVG VLLGTTLGWT
RVPEDLDSSV PVGVPDSQDP TAASSTDRSI RYRPLCQFYD DTSTSVRMIQ TSLKEPSRQW
SDQPCFPASR HTTLFTNQRG RPPVLPLDAY GSPDAILRVN FSAVAFPTHQ TPILGFGGAF
TEASGRNYQR LSEQGKQAVM ELLFGAQGLG YALGRVHINS CDFSVKSYTF DDVEDDFPLD
HFDVGVHHDV EVGMVDMALR ATSILRQGWP SEDAYEGNLR LYASPWSPPA WMKKPTWEDA
KNATHAAKMT YSAEPTCLRE GVGSQSRYAA SWALYFSKFV TAYRDLGLPL WGVTVQNEPE
FAAPWEACAY TPTTQHDFLT NHLGPQLERD HPDLKIFMFD HNKDHINIWG QKMLNASSNA
SRYVDGTAYH WYAGGMDRLL DGALGNANLH QFQEDMQTYG IQSNHILFNS EACHCPTTGY
AGGDINIYWA RAERYAHTIL ADLAAGSHGW VEWNLLLDSI GGPNHLGNLC ESSLLAVPHR
ALNADPHTPP LPDFETDGPM GKVNIGDGRT REELNALGFP AKFLDVGVAV QPIYYYMGHI
SRYVRPGSVA VPGLVTANAQ PGVRIFRPSG QVVVGGGEND LARHGMEITA WPCEGSTRQH
FTWNADSKRH IQVQGHDWLG NPTKSCFARK SDPSLGTMSL TDCKPGQVGI YDIVPIAEKE
GDQRFFQIVL TNHPKLDRPC LIIHQLGNDG GAYGPRGGAP VTLGSCSSKA ARWKVDETTG
EASSTFFSDD DGNENEVCMT TGWPFLQMGA FLTPNGEVPK TVVILNEAKE SANFAIQDQD
KVIVTASIPP RSIQTILLQ
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