Gene PHATRDRAFT_46320 details

Gene Information

• Locus tag: PHATRDRAFT_46320
• ID: 7201504
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011677
• Strand: -
• Start bp: 916898
• End bp: 920214
• Gene Length: 3317 bp
• Protein Length: 1022 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002180731
• Protein GI: 219119962

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAAGGATCC CTTGGTCGTC GAGAAGACTG GCTGGTGTTA TCATCGTCGG TGTGTAGTAT 
CGTTATCGTC ATCATGGCGA CTTCCAACTT TTTCCACAAG CCCGAGTTGG CCTTGCGACG 
CGCGCAGGAA CTCGAAGGCA TCCATCAGGA CGACGCCGCC TTGGCCATGT TGCACGAAGT 
GCTATCCTCA CGCCGTCATC GTACCTGGAG TCCAGCCTTT GAACAAATCA TGATCGTGTA 
CGTTGATCTC TGCCTCAAGC TGTACAAAAC ACGCGAAGCC AAAGATGGTC TGCATCAGTA 
CCGTAATTTG AGTCAAACAC AGGCTCCGGG ATCGTTGGAA AAGGTGATTC GCTACTTACT 
CACCGCGGCG GAGAAAAAGT GTACCGAAGC CAAAGCTTCC GCGGACGCCC AGCAGGATCA 
GATTTTGGAA GAGAATGGGA ATGGCGACGA CGAAGACGGT TTCCGGGCTT CTCCGCAGGC 
AATCTTGCTA TCCACCATGT CCACGGACCC GGCCAAATCG CAACGCGATT CCGCCCTCCT 
CGTGCCGTCC CTCAAGTTTC TCTGGGAAAC CTACCGAGCC GTTCTGGACA TTTTGCGATC 
CAACTCCAAA CTAGAACACG TCTACCACTT TGCGGCACAG AGCGCCTTGC AGTTCTGTCA 
AGATTACAAA CGTCGAATGG AGTTTAGGAA TCTTTGTGAC ATGCTCAGAC TCCATCTCGG 
CAATCTGCGC CAGTACGGCA ATCTCGACGC CAACGATGAC GGAAAAACCA ACAACAAGGT 
ACGTATGCCA CGAATTGACC TTTCGCTCGA CAATCCCCCG AAACGGTGCA CTCACACTGC 
TCTTAAACTT TGGTGGGTCT CGCGTTTGCG CCATTAGGTC CGCGGTTGGG AAGGTTGGAC 
TACGGAATCG ATCGAGTTGC ACCTACAAAC GCGCTTCATA CAGCTCGAAA CCGCCAGCGT 
CCTGCACCGC TACACCGAAG GATTCCGGAC ATGCGAGGAT ATTTTCAATA TTCTCCAAAT 
CAGCCAGGCT CGTCGCAAGC ACAATCCCGA CGTGCCCGCA CCCAAGGCCA AGCTCATGGC 
ATCCTACTAC GAAAAGCTCA CGACCCTGTT TTGGGTTTCG GAAAATTACC TTTTCCACGC 
CTTTGCCTGG TACAAGTACT ATACCTTGTG CAAAGAGTTC AATCGTGGCA TGTCGGAAGA 
CACGAAGCGT ATGCAGGCGT CGGCCGTCCT ATTGGCCGCC TTGTGCATCC CTTCCGTCCC 
CGCGAACGAA AGCAAGGCCT CGCATTCCAA CCAACATACT ATTGCCACCA CGGTCGAAGA 
CGGGATAGTG AAGCAAAAAA TGGCCCGCAT GGCTACCTTG TTGGGCTTTC ATACGCGCAA 
CCCGACCCGC GACGCCTTGC TGGCGGAAAT CCGTAGCAAG GGGATTCTGG AACAGGCTCC 
GGCCTACTTG AGAGAACTCT ACGAGCTTTT GGAAGAAACC AACGATCCGC TTATTATGGT 
TCAAAAGGCC AAGCCGCTTT TGGAACAGCT GCAGCAAGAG CTCGGGGCCA CCACGTCTAA 
CGATGTCAAG AACGACGACG TCGATGACAC GACCTTGGGT CGCTACGTTA AGCCCATCAC 
CAACGTGCTG TTACTGAAAC TCATTCGCAA CTTGTCGGCA GCTTACCACA CGGTATCAAT 
GGATCATTTG AAATCTCTCA CGTCTGGTCT CGATCTGAGC TTCGAACAGG TGGAAAAGAC 
CATCGTCACG AGTTCAAAAA CGCTGGCTGT GCGTCTGGAT CACCGTGCCG GCTGTCTACG 
TTTCGGTAAC GTGCAACTGG AATCGGACGC AATGCGCTCG CAGCTGGTAA ACTTATCGAA 
GCAGCTACAG GCCGTGTCCA ACGTTCTGAC CCCACCGGAT CGGCAAAGCG TGTTGCAGTC 
CCGACTGTCC ACGTACCAAT CGGTCCGCGA AAATCTCCAC GCCGAACACG CGGCCGTGCT 
GGAACGTAAA AACTTGATCG AAACGCGCAA AGAAGAAACC GAACGAGTAG CGCAAGAAAA 
GTCTAAGCAA GAAGCCCGTG TCAAGGCGGA AGAGGAAGCA GCGCGTAAGG CCGAAGAAGA 
ACAGCGCATC GTGCGGGAAC AGCGCTTGCG CGAGATTGAA AAGCAGCGCA AAATTCAACA 
AGAGTTGGAC AATCAAGAGA AGAAACGGTT TCTGGCCGCC ATGGGAAAAA AGACGGAGGA 
TATTTCGGAA GAGCAAATCG CCAAGATCGA TACGGAAGCC TTGCAGCGGG AGCACGAAGC 
AAAGATCAAC AAGGAACGTG AGGAAGCCGA ACGCAAAACT CGTGAGACGG CCAAGAAACT 
GGATTATTTG GTCCGGGCGA TTCGTATCGA GGAACTGCCT CTGATCAAGA AGAAGTACGA 
AGAAAAGACG AAATTGGACA AGGAGCGGTA CGAACAAGAG AACATCGAGA AGGCGCAAAA 
GGCTAAGTTG CAATGGGAAG CCGATGTGAA AGACAAGGCT GTGTTGGAAT CCCACAACGT 
CTTTGCCTAC TGCTCTGAGT TTGAAAACTC CGTAATGGTG GGACGCCAAG CCGAGCATGA 
CGTAATTTGC CAAAGAGCCG AAGAAGAGGC AGAAATGGAA GCCGAAAAGG CCAAAATTTC 
CCGAGCTCGC AAGCGGAAAG CAGCGGAGGA GAAGCTTATG GCTGCCGAAG CTGCCCGTGA 
GGCAGAGGAA GAAGCTCGCC GGAAGGAAGA GGAGGAGAAG CGCAAGAAAG ATGAGGCTCG 
CCGGGAGCGA GAAGCCAAAG AGGAAGAGCG CCGGCGGGCA GAAGACGAAC GAATGGAGGA 
AGAGCGTCGA AAAAAGGCAG GTCCTGCCAA GTACATTCCT CCATCACAAC GCTTGGCTAG 
CGGTGGCGAA CGTGGTGGCG GCGGTGGAGA AGACCGCCCC AGTCGATTTG GTGGTGCCGG 
ATCCTACCCT GGAGGTGGAC GTTATGAAGG CCGTTCGGAC GATCGAGGCG GTGGCTGGCG 
CGGTGGTGGC GACCGAAGTG GTGATTATCG TAGAGGTGGA GATGATCGCA GAGGTGGAGA 
TGATCGCAGA GGTGGAGATG ATCGCAGAGG TGGAGACGAT CGCAGAGGTG GAGACGATCG 
TAGAGAAGGA GACGATCGTA GAGGAGGCGC ATACGGAGGA GATCGTCGTG GCGGCGCAGG 
GAGTGGTAGC TACAACGATC GTCGTGGGCC CCCTTCGGAC GGCAACAGTC GTTGGCGCTA 
AGGAATTTCA TTGGTGGCCG TGAAGAAACA AAAGTAGCTT TTACACAGAG GTTAGACGTC 
TTTCTATTTT ACGAGTA 

 

Protein sequence

MATSNFFHKP ELALRRAQEL EGIHQDDAAL AMLHEVLSSR RHRTWSPAFE QIMIVYVDLC 
LKLYKTREAK DGLHQYRNLS QTQAPGSLEK VIRYLLTAAE KKCTEAKASA DAQQDQILEE 
NGNGDDEDGF RASPQAILLS TMSTDPAKSQ RDSALLVPSL KFLWETYRAV LDILRSNSKL 
EHVYHFAAQS ALQFCQDYKR RMEFRNLCDM LRLHLGNLRQ YGNLDANDDG KTNNKVRGWE 
GWTTESIELH LQTRFIQLET ASVLHRYTEG FRTCEDIFNI LQISQARRKH NPDVPAPKAK 
LMASYYEKLT TLFWVSENYL FHAFAWYKYY TLCKEFNRGM SEDTKRMQAS AVLLAALCIP 
SVPANESKAS HSNQHTIATT VEDGIVKQKM ARMATLLGFH TRNPTRDALL AEIRSKGILE 
QAPAYLRELY ELLEETNDPL IMVQKAKPLL EQLQQELGAT TSNDVKNDDV DDTTLGRYVK 
PITNVLLLKL IRNLSAAYHT VSMDHLKSLT SGLDLSFEQV EKTIVTSSKT LAVRLDHRAG 
CLRFGNVQLE SDAMRSQLVN LSKQLQAVSN VLTPPDRQSV LQSRLSTYQS VRENLHAEHA 
AVLERKNLIE TRKEETERVA QEKSKQEARV KAEEEAARKA EEEQRIVREQ RLREIEKQRK 
IQQELDNQEK KRFLAAMGKK TEDISEEQIA KIDTEALQRE HEAKINKERE EAERKTRETA 
KKLDYLVRAI RIEELPLIKK KYEEKTKLDK ERYEQENIEK AQKAKLQWEA DVKDKAVLES 
HNVFAYCSEF ENSVMVGRQA EHDVICQRAE EEAEMEAEKA KISRARKRKA AEEKLMAAEA 
AREAEEEARR KEEEEKRKKD EARREREAKE EERRRAEDER MEEERRKKAG PAKYIPPSQR 
LASGGERGGG GGEDRPSRFG GAGSYPGGGR YEGRSDDRGG GWRGGGDRSG DYRRGGDDRR 
GGDDRRGGDD RRGGDDRRGG DDRREGDDRR GGAYGGDRRG GAGSGSYNDR RGPPSDGNSR 
WR