Gene PHATRDRAFT_46317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46317 
Symbol 
ID7201386 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp908667 
End bp909952 
Gene Length1286 bp 
Protein Length395 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180537 
Protein GI219119559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTAC CACATCGAGC CGTAGCACCT TTCCCCTACC ATAGACCGCT TCAAGTTCAA 
GGAGAAGAGT CAAAAAACTC GGATAGAAAT TTGCGGCGTG ATCATCTCTT GAGGGAAAGC
TTTCTGGCTG TCCGCTTTGC TGAGGCTTTC GTTCGTCTTG TCCGCGCTGC CTCGCTTTCG
CCACCACACA AGAACTATCT GTTGGCAATA TGCGACGATC GCCGTCGAAG CAAGCTCGCT
GGTGTCTCGT GTCTTCTTTG GCCTTCTTAC TGGCACCGGG GTCTGCTGTA GATGCCTTTG
CATCGCTGTC CGGGATGAGG CAGCACTGTG CAAATAACGT CGGAGCATAC TTCCCGCAAC
ATAAACCGAC TCTGCTGTTA CGCAGCAACA AAGACGACAA CGCTAGTAAC AATCCAGAAT
TGGAAAAGAC CTTTGGCGGT TATACAGCCA AACAGCGTCT ACGCGAAGAG GTCGAATCCC
CCTTTCGCAC GGTCCGTCTC TTTTTCTTTG GCTCTTCCAC CGGCTCGGCA CTCACAGCAT
TGTACTTTTC CCTCCTCAAC ATCCTTAAGG CCAAGTCGGG ATTATATACG GACGGCCCGT
CTCTGGACGA CGCCCTGCAG AGTACGGCTA TCAATGTCGC GGCTGTCCTC ATCTGCGGTT
ATCTTACCTA CCGCGACTGG AAAGCCGGCG AGACGAACCT GGCTCGCATC GCCAAGGGCG
GTGCCCTCGC TCAGCTTGTC GTGAACGGTC CTTCCCCACG TACTCTCGCC AGCTACCGCC
GGAACGCCCG GGTACTCATC GCCGTTGGTG GGGACGGTTA CATTGATACC CTTTGTCGGA
GCCTCAACGC CGATCAACGT GCCGACGTCA ATTCGTTGCC TCAAGCACTC AGCGAAGCGG
AAGTTGTAAT TGTGCCAGTG TTGCTGCAAA GGAATGGCGA GACAGATTGG CGAGTGGGAG
ACGTCAAGAG TCGTTGGAGT GCTACCGAAC CGACCGACAG CGATCGAAAC ATGGACGTCA
CACGCGCCGA CGAGGTGGTG GCTTTTCCGC GGAGCCCTGG TCCGTGGATA GACTACCTAC
GCGATGAAAT CGCCACGGCA CAGTCCCAAG GGTTTGATGT GCTGCAAAAG GGTTTCATTA
TTGTCGTCAA GAAAAATGGC CGTATCCTTC GACGAGCCAC GGGACAACCA CCCTTTGACG
AATTGGTGTC CAACATGGAA GTCCTGGACG GATCCAAGTT TGGCATGCCC GGTGACGATG
AAAAATATTC TTCCAAACCG CTGTAG
 
Protein sequence
MALPHRAVAP FPYHRPLQVQ GEESKNSDRN LRRDHLLRES FLAVRFAEAF VRLVRAASLS 
PPHKNYLLAI CDDRRRSKLA GVSCLLWPSY WHRGLLNKDD NASNNPELEK TFGGYTAKQR
LREEVESPFR TVRLFFFGSS TGSALTALYF SLLNILKAKS GLYTDGPSLD DALQSTAINV
AAVLICGYLT YRDWKAGETN LARIAKGGAL AQLVVNGPSP RTLASYRRNA RVLIAVGGDG
YIDTLCRSLN ADQRADVNSL PQALSEAEVV IVPVLLQRNG ETDWRVGDVK SRWSATEPTD
SDRNMDVTRA DEVVAFPRSP GPWIDYLRDE IATAQSQGFD VLQKGFIIVV KKNGRILRRA
TGQPPFDELV SNMEVLDGSK FGMPGDDEKY SSKPL