Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46317 |
Symbol | |
ID | 7201386 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 908667 |
End bp | 909952 |
Gene Length | 1286 bp |
Protein Length | 395 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180537 |
Protein GI | 219119559 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCTAC CACATCGAGC CGTAGCACCT TTCCCCTACC ATAGACCGCT TCAAGTTCAA GGAGAAGAGT CAAAAAACTC GGATAGAAAT TTGCGGCGTG ATCATCTCTT GAGGGAAAGC TTTCTGGCTG TCCGCTTTGC TGAGGCTTTC GTTCGTCTTG TCCGCGCTGC CTCGCTTTCG CCACCACACA AGAACTATCT GTTGGCAATA TGCGACGATC GCCGTCGAAG CAAGCTCGCT GGTGTCTCGT GTCTTCTTTG GCCTTCTTAC TGGCACCGGG GTCTGCTGTA GATGCCTTTG CATCGCTGTC CGGGATGAGG CAGCACTGTG CAAATAACGT CGGAGCATAC TTCCCGCAAC ATAAACCGAC TCTGCTGTTA CGCAGCAACA AAGACGACAA CGCTAGTAAC AATCCAGAAT TGGAAAAGAC CTTTGGCGGT TATACAGCCA AACAGCGTCT ACGCGAAGAG GTCGAATCCC CCTTTCGCAC GGTCCGTCTC TTTTTCTTTG GCTCTTCCAC CGGCTCGGCA CTCACAGCAT TGTACTTTTC CCTCCTCAAC ATCCTTAAGG CCAAGTCGGG ATTATATACG GACGGCCCGT CTCTGGACGA CGCCCTGCAG AGTACGGCTA TCAATGTCGC GGCTGTCCTC ATCTGCGGTT ATCTTACCTA CCGCGACTGG AAAGCCGGCG AGACGAACCT GGCTCGCATC GCCAAGGGCG GTGCCCTCGC TCAGCTTGTC GTGAACGGTC CTTCCCCACG TACTCTCGCC AGCTACCGCC GGAACGCCCG GGTACTCATC GCCGTTGGTG GGGACGGTTA CATTGATACC CTTTGTCGGA GCCTCAACGC CGATCAACGT GCCGACGTCA ATTCGTTGCC TCAAGCACTC AGCGAAGCGG AAGTTGTAAT TGTGCCAGTG TTGCTGCAAA GGAATGGCGA GACAGATTGG CGAGTGGGAG ACGTCAAGAG TCGTTGGAGT GCTACCGAAC CGACCGACAG CGATCGAAAC ATGGACGTCA CACGCGCCGA CGAGGTGGTG GCTTTTCCGC GGAGCCCTGG TCCGTGGATA GACTACCTAC GCGATGAAAT CGCCACGGCA CAGTCCCAAG GGTTTGATGT GCTGCAAAAG GGTTTCATTA TTGTCGTCAA GAAAAATGGC CGTATCCTTC GACGAGCCAC GGGACAACCA CCCTTTGACG AATTGGTGTC CAACATGGAA GTCCTGGACG GATCCAAGTT TGGCATGCCC GGTGACGATG AAAAATATTC TTCCAAACCG CTGTAG
|
Protein sequence | MALPHRAVAP FPYHRPLQVQ GEESKNSDRN LRRDHLLRES FLAVRFAEAF VRLVRAASLS PPHKNYLLAI CDDRRRSKLA GVSCLLWPSY WHRGLLNKDD NASNNPELEK TFGGYTAKQR LREEVESPFR TVRLFFFGSS TGSALTALYF SLLNILKAKS GLYTDGPSLD DALQSTAINV AAVLICGYLT YRDWKAGETN LARIAKGGAL AQLVVNGPSP RTLASYRRNA RVLIAVGGDG YIDTLCRSLN ADQRADVNSL PQALSEAEVV IVPVLLQRNG ETDWRVGDVK SRWSATEPTD SDRNMDVTRA DEVVAFPRSP GPWIDYLRDE IATAQSQGFD VLQKGFIIVV KKNGRILRRA TGQPPFDELV SNMEVLDGSK FGMPGDDEKY SSKPL
|
| |