| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46314 |
|---|
| Symbol | |
|---|
| ID | 7201383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | - |
|---|
| Start bp | 901390 |
|---|
| End bp | 903161 |
|---|
| Gene Length | 1772 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180727 |
|---|
| Protein GI | 219119953 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACTTTTTCA TGATAAAGGA TGGGATTGAA CAAGCAATCG GTGGCTGTCA TATTGCTCGT
GGCTTGTTCA ATTGCCAGGA CTGTGCTTCA TTTTCAAACA TTTTCCAATC TATCACTGCA
GCAGGTTCGT AGCACGGCCT ACAGCCCAGA GGTTGACAAA CGACAAATTC GAGATGACAC
CAGTTTGTTT CGGTCAGGCC AGCGTTTTCG TCCGAAAAAC AGCGGAGAGT CCGCTGCTAC
AGGAAAATGC GCCATCAATC TGTTCGGGCT ACCCAGAGCC TTTCAATCCT TAGTGTTACC
CTCGTTGGTA CAGAGTGTGA TTCGTCCCAA CGCACTCCAC AACTGTGACT ATTTTGTACA
CTACTACTAC TTGACGTATG AAAAGGAGGG ACGGGCCAAT TCCGGAGGCC GCCTTGATCC
GGACGAGATA TTGCTGCTGA AGCAAGCTGT CCACAATGTT TCGCCCAACT CGATCGTCGA
GTTTCGCTAC GACCAAGAAC AGGCCTTTTG GGATCAATAC CAGCCGCTCA TTGATAGAAT
ACGGACCGTC AACGATACAG ATGGACATTA TTTGTACTTT CCGTGGCGTG ACAAGTCGTA
TTTGTATACA CTCACCACTG ATAATATTGT CAAAATGTGG CACAGCATCC AATCGGCTTG
GGAGCTAATG ACGGAACACG AGACAATGAA GTCTCGACGA TATGATCGTG TGGCCATGTT
GCGGTCGGAC GTGGTGTATA TGACCCCAAT CGACCTTTTC CAAGCCAATC GGCAGCCTCT
CCGAGATGGC GCCAAAGTAG CTGTCGTTCC TGCCTTTGGG CGGTATCCTG TCAGTGATCG
CATGATTATT GGACCACGAG ACGCTGTGGA AATATGGGCC GCACAGCGAT TTGACCGGCT
TGAGACCCAT GTGCAATTTG TGCATGACAA GCATCCGGGA TGGGGTATGC ACTCAGAAAG
GTTCGTCAAG TGGACAATCT TTCCAGCTAT TCGAGAAACA AATACAACTA TTGTCGAAGA
CGACTTTATG TGTTTCTTCC GCGCTCGTGC AGATGACACA GTAATGATTA AGGATTGTGA
GGGGAATAGA TATCAGAACG CTGCCCCGTC TATTGTGAAG AATCTTGGGA AAGACAAGAT
CGAAGTGTTG GAGTCTATTC TGGGGCGGAA GTGTCGAGAC AGGACGGTAG CTCTGTCCTC
TTCGCTCTTG CAATGCCCGG CTCAGGAAGC TGGGTGAGGA ACACGAAACC GTGATATCCC
AGAAGTATGA TGCATGTCCA TGTTATAATC GGATATTCAG ACATGACCAT AATCTACGTG
TTTCGAGGCA ATCGAGAACC ACTCTGAGCT GGCGCCAAAG TTGCCGTCGT TCCTGCCTTT
GGGCGGAAGG CACTCAACGA CAGTATGGCG GCAATGAAGG CACAGATCAA CGATCGTCAG
AATGGGCAGG AGGGAGTTGC CACTCCGTCG TTCATGCAGA ATCTTCGCGA AGACGCCTCC
GAACGGCTGA AGACAATTCA TGGCCGTAAA ACTCTCAGTG CAACACCAGA CTCAGTGGCT
ACAAGTTTGC GATAGCCGAA GCAGGAGATT TATGCTTTTA GCTATTCCAT TGACCGCACT
TCTGAGCGCT TTACAGTTAA TGTAAGACCT GCATGAGTTC ACGGATGACC CGTCCCGCCT
TCTGTGATTC GCAATCGCGT AATGTGGAGC AATGGGGCAC GGTAAATTTT CGTCTCCGGA
ACTAGAGGTG TAATTCTTTT CTTTTTACTG CT
|
|---|
| Protein sequence | MGLNKQSVAV ILLVACSIAR TVLHFQTFSN LSLQQVRSTA YSPEVDKRQI RDDTSLFRSG
QRFRPKNSGE SAATGKCAIN LFGLPRAFQS LVLPSLVQSV IRPNALHNCD YFVHYYYLTY
EKEGRANSGG RLDPDEILLL KQAVHNVSPN SIVEFRYDQE QAFWDQYQPL IDRIRTVNDT
DGHYLYFPWR DKSYLYTLTT DNIVKMWHSI QSAWELMTEH ETMKSRRYDR VAMLRSDVVY
MTPIDLFQAN RQPLRDGAKV AVVPAFGRYP VSDRMIIGPR DAVEIWAAQR FDRLETHVQF
VHDKHPGWGM HSERFVKWTI FPAIRETNTT IVEDDFMCFF RARADDTVMI KDCEGNRYQN
AAPSIVKNLG KDKIEVLESI LGRKCRDRTV ALSSSLLQCP AQEAG
|
|---|
| |