Gene PHATRDRAFT_46310 details

Gene Information

• Locus tag: PHATRDRAFT_46310
• ID: 7201500
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011677
• Strand: -
• Start bp: 890585
• End bp: 894640
• Gene Length: 4056 bp
• Protein Length: 1269 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002180725
• Protein GI: 219119949

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.789471
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCCAT CGCATCGGCA CCCTTTTCCT CCATCTACGG GTTCCACCAA CAACGTGCGA 
GACGGAGGAG CGGCGAACGA ACTCGTGATG TGTCCTTCCG TCATCCGACT CTGTAGTGTG 
CAATCCCTGA CTATATCAAG AGTCATTGCC AGATATATTC TACAATAGGT ATAACTGAAC 
TCTTCCAGTA CACCTGCGGA CCGAACCCTC CAAGGTCCTA AATACATTTC CTCGGACGCG 
GTCTCGTTTG GTTCTGGATG GACTGCGAAC ACTTCTTTCC CGTGCGTTTT TGTAGGGGAG 
AGAAGACACC AGACATACCT AGAGAGAATT CCTTACGTAC CGGACAAAGC CGCCTGGAAA 
CGATTTCGGC TCTCGTGTTC CATTCGAGAG ACGCCGTACG TCGTTTTCCG TCGGTTTCGT 
CACTTTTGTC GAAACGAATC CCCGCTTGTC TACCAGGATA TATACTACGT TCGACCCGAG 
TCCGTTCCTC CTCAACCAAC CAACAACCTT CAAGCGGACG GAATTGGTGC CGCGGTGCCT 
TGCGGAACAC CAAACCCATT CTGTGTAGTT CCGTTGTACG CCAGTGCACC CGTCGCTGCC 
ACCCATCGAG ACACCCATCG TCGAAAGGCC TTCCATCGCT CCCGTGCGGC ACGTGCTGAC 
AACCCGCGTG GCACGACCAC CCCTGGGACC GTTTCCCGAA AATCAAAAGT CGATCGATCG 
TACAAAACAC ATTACAAGAA GAACGTCATG GAAGACGACC TTCGAAACTC TACGATTGAA 
CATTCGGATC AAAACAGTAG TCAAGACGCC CTCGAACATG TTAACGAATC CCACAACGAC 
GCCTCAGTTA ACGAATCCCA CAACGACGCC TTACTCTTTG ACGGTGAATT ACACGACACT 
ACCGAACAAC CAAAAGAATT GCCGCTTCCG AACAAAGTTG ACGAACACAA CGAATTGGAC 
CTGAACGATC TCCGCTCCTC CACACACAAT ACGAACCTTA CAGCCACCAG TTTGCAGGAA 
TCCTCGTACG CAAGTCTCAA CGTCGAGCAC TTGCTCGCCG AAATGGACTG TGCGGCACCT 
CCGGAAATGA CCACACCGGG ACCCCGACAC GCACCCTGGG CATCGGCTCC CTCTTCCGTA 
CCGCGGCAAC CCAGCTTGCG CGATATTATG ATGGAGCAGC AGCAACGACA ACACCAAGCC 
GAAAAGTCTT CCCTCTTAAT GGTCGAATTG GCTCAGGAAG AAGAGTTGAT TCGGATAGCC 
CTGGAACGTT CCCTGACCGA TGTGGGATCG GTACATTCCG CGACTGCCGC GTCCACTCGG 
ACCGCCCCGC ACGAGTCCCA CGCTCCCCCC GGCGACCCGC AAAATGCACA ACCAGCAGCG 
GTTTCGGAAC GTCCCTCGGT ACGAAAAGAA ACACAAGTGT CCAAAACAGA CCTGAGCGCC 
GTGGAAGTAT CGTTGATTGA ACAAGCCTTA CGCGAAGGCA TTCGGCGACA CCAGAACGAT 
TTTCATCACA ACGCCTCCTT GCCCCAAAAG CCTCATCCTG TGGCTCGCAT GCTTGCTACT 
CTTCACGAAG AAGAAACGAC GGTGGGTTCT TCCCCCAATG AGGATGATGA CTTGTCTCCG 
GAAGCTCTGA CGGATAGCGA TCCAGAGCCA TCTTTGGATT TGCCCGTACG ACCGTCGTCC 
ACCACTTTGT CCTCTTCCCC GCCGACTACT CCGGCTGGAC AAGGATCGTT GCAGAACCTT 
GAAGGTTCTC ACAAGGACTC GTCCCCTCTG ACGACTCCAC TTAGTAGCAG TTCCTGGCGG 
CTCCGTGAGG GTCAATACGC GTGCGCTGGG GCGTCACCCG CTTCAACGTC CGTCTCCGTT 
ACATCGTCCT GGACCCCCCG TGATGCGGCT TCCCCAGACA ATGGGATCAG TCCCGCGAGT 
ACCAGCAGTG CGAGAAGTGC TGGCTACAAC TACCGATCCC CACTCGTTCA GCACTTAGGT 
CCCTCGTTCC AGCGTTTGGA GGAACTTTCG TCAGATGAGC TATTGCTGGT CGATTCAGCA 
AGGTCCATTT CTGGGGCCTC TTCTGCAATG GAGTCGTCCT CTGCTACCGT TCCGCGACAC 
GCTGTTCGTG ATCCGTTACT CGGATTCACG TACCTTGACG AGTACCGCAA CACAAACGAA 
AGCCAAAGTC AAGAGTGGGA TGGGTCTGAA GTGCAACAAA GGCAAAAAGC CCTCCGCGCC 
TCGCAGTCAT CCGGCCTCTC TGCGGGACCC ATGCTGGCTC CACCATCTGC CGATATGCCT 
TTACCACCCG TCACAACCTT GCGTTCCGTT AGTACAGCGG TCACCACCGC TAGTACCGCC 
GCCGACTCGG AGACTTCGAT CACGGGTCCG GCCACCGCCA ATCAGTCCTT CGCCGACGAC 
TACGACTGGA GGGGCGCAGA GCATCACTTG TCCGCTGAGG AAATACGGTC GATTCAGCAG 
GCACTGACCG ATGACGATAC GTGGCAAGAG AACAGCGCAC TAGTCGATGC GCCTGAGGCA 
GGAGATACCC ATACCGACAC TCAAAACGGG GAACTTTCGG CGGCTGAGGC GGAAGCTATT 
GAACGAGCCT TACGGGAAGC CGACGAAGAA TCGGAAAGAG ATTCTCTTTT GCTCGCTTGG 
CAAATGCAGG ACGAAGAGGA AGCACGCCAG CGACAGCAAG TGGCGGCCCG AGGTACGCAG 
CAAGGCAATA TCCGAACCAT CACTCGCGCC GAGCTTCGAG CCGAGCAGTC TGGCCGATTT 
AGCACCATTG GGGCCGTTCA TTCTTCGGAT CCACCCGTTA TGCGGCATCC TTTAGAGGAC 
GAAGAAGAAG TGCAGTTAGC CGCGGCAGGT TTTCGCATGA ACAGCACCAC TCGACAGGAG 
TGGTCCCGAC GTGACCAGCA CTCCGTCGTA GGACCCAACA ACGAAGTTCG TACCAAACAC 
GATGCCGAAC TCCACGAGCA GGCCAACGCG CACCGGCTGG GTTTGGATAC CGACGAGCAC 
GGACTAGCGC GAATCGGGAA CAAGGCCTTC AATTCGTTCC TTCACTCTGT CCGTAGAGAC 
AAGAAAAAGG GGGTTGCCAC CCACGGCACC GGGAGGGCTG GTTCGGATAC CGATGCAACC 
AAGGGTGGCG CCATGGACCC AGCTGTGCGC ATGCAAATTA CTCGTGCGAT CAATAGCGGG 
TTGATCGAAC GATGCAACGG AGTCGTGAAG GAGGGTAAAG AGGCTGTGGT GTATCATGCC 
GAAAAGGGCG AGGAAAGCGA AGGGTTTGAC GTTGCAATGA AAGTTTTCAA GCGTATACAA 
GAATTCAAGG GCCGCGGTGA CTACGTAGAA GGTGACCCTA GGTATGCCCG TGCCAATTTC 
AGGAAAGCAA GTAATAGAGA GCAGCTGGAA ATTTGGGCTG AGAAAGAATT TCGAAATTTA 
ATGAGAGCAA TTCGAGCCGG CGTTCCTGTG CCAACGCCAC TTTTACAAAA GGAAAACGTT 
TTGTTCATGC GTTTCATGGG CATGAATGGG TGGCCGTCAC CACAGTTGAG AGAACTGGAT 
TTGCGAAAAG GTAGCAAGAA ATGGACGACT CTTTACACTC AGGTGATGGA GGCTATCCAA 
AGGTAAGTCC GTGAAACCTT TGACAGCAAC GTAAAAACAA ATCCTACATA GGGCTCACGT 
GGAACCATTG CCGTCGTTCC TGATTCTGCA GACTATATAC GAAAGGTAGA CTAGTGCATG 
GGGATCTGAG CGAGTACAAT ATAATGGTGG TTCCCGCATT TCTCGTCGAC AATCCATCTA 
CATACGTTGA AAATGATCAG GATCTTCAAC CAGTGTTGAT TGATTTTGGA CAGGCTGTAG 
ATCTACGTCA CCCTGAAGCG AGACCGCTGC TGGAGCGCGA CTTGGATAGA GTGATTGCTT 
TTTTCAAACG GCAAGGAGTC GAAACCATGC GTATTTCCGA TGCAGTCTCC TTTGTTGTTA 
ACGAGGCCGA ATTGAAGCCG ATCAATGTAC CGAGCTAGTG TTGAGCACTA TGATTACTTT 
CTCTTGTAAG CAGCGAAAAA GGAGTTTTCG GCTAAA 

 

Protein sequence

MFPSHRHPFP PSTGSTNNVR DGGAANELVI TPADRTLQGP KYISSDAVSF GSGWTANTSF 
PCVFVGERRH QTYLERIPYV PDKAAWKRFR LSCSIRETPY VVFRRFRHFC RNESPLVYQD 
IYYVRPESVP PQPTNNLQAD GIGAAVPCGT PNPFCVVPLY ASAPVAATHR DTHRRKAFHR 
SRAARADNPR GTTTPGTVSR KSKVDRSYKT HYKKNVMEDD LRNSTIEHSD QNSSQDALEH 
VNESHNDASV NESHNDALLF DGELHDTTEQ PKELPLPNKV DEHNELDLND LRSSTHNTNL 
TATSLQESSY ASLNVEHLLA EMDCAAPPEM TTPGPRHAPW ASAPSSVPRQ PSLRDIMMEQ 
QQRQHQAEKS SLLMVELAQE EELIRIALER SLTDVGSVHS ATAASTRTAP HESHAPPGDP 
QNAQPAAVSE RPSVRKETQV SKTDLSAVEV SLIEQALREG IRRHQNDFHH NASLPQKPHP 
VARMLATLHE EETTVGSSPN EDDDLSPEAL TDSDPEPSLD LPVRPSSTTL SSSPPTTPAG 
QGSLQNLEGS HKDSSPLTTP LSSSSWRLRE GQYACAGASP ASTSVSVTSS WTPRDAASPD 
NGISPASTSS ARSAGYNYRS PLVQHLGPSF QRLEELSSDE LLLVDSARSI SGASSAMESS 
SATVPRHAVR DPLLGFTYLD EYRNTNESQS QEWDGSEVQQ RQKALRASQS SGLSAGPMLA 
PPSADMPLPP VTTLRSVSTA VTTASTAADS ETSITGPATA NQSFADDYDW RGAEHHLSAE 
EIRSIQQALT DDDTWQENSA LVDAPEAGDT HTDTQNGELS AAEAEAIERA LREADEESER 
DSLLLAWQMQ DEEEARQRQQ VAARGTQQGN IRTITRAELR AEQSGRFSTI GAVHSSDPPV 
MRHPLEDEEE VQLAAAGFRM NSTTRQEWSR RDQHSVVGPN NEVRTKHDAE LHEQANAHRL 
GLDTDEHGLA RIGNKAFNSF LHSVRRDKKK GVATHGTGRA GSDTDATKGG AMDPAVRMQI 
TRAINSGLIE RCNGVVKEGK EAVVYHAEKG EESEGFDVAM KVFKRIQEFK GRGDYVEGDP 
RYARANFRKA SNREQLEIWA EKEFRNLMRA IRAGVPVPTP LLQKENVLFM RFMGMNGWPS 
PQLRELDLRK GSKKWTTLYT QVMEAIQRLY TKGRLVHGDL SEYNIMVVPA FLVDNPSTYV 
ENDQDLQPVL IDFGQAVDLR HPEARPLLER DLDRVIAFFK RQGVETMRIS DAVSFVVNEA 
ELKPINVPS