Gene PHATRDRAFT_46304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46304 
Symbol 
ID7201497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp871484 
End bp872326 
Gene Length843 bp 
Protein Length280 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180723 
Protein GI219119945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.144157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCT ACCAGCTTTC GATGCACGCC GAGCATCTAC CGCGAAACTG GTTTCACACA 
CCGTCGCCAT ATGCCGTTGC GACCATCACC GATGGTCCGC TCAAAGGCAC CAAGATTGGT
CAGACGGAAA CCCTGCCAAA GACTACCGAT CCGGACTGGG TTGCGGTACT CTTTTTCGAA
ACCGATTCAT CCATTTACAT GCCCCTCAAA ATACAGGTCT TTGACGAACG CGAGTATAAC
GACGATATCT TGTTGGGGGA AGCTACCTTC GAAGCCACTG AGATTTTTGG TGCTGCGGGA
CATTTGAAGT CCGCCCAATT GAACTACAAA GGGCCCGCCC AACTGTACGT ATCCGTCCAA
ACCTCAATAC AAGGAAACGA CCGCGGAATT ATGGAATTAC AGTTTCGAGG ATTGGATATA
AAGAATATTG AACCTGGTCT GTTAGGATTG GGACGATCGG ATCCCTTTCT TGAACTGGCC
AAAAAGAATG CGGATCATAC GGCGGGTGTG GTAAGATGGA ATGTCGTGCA CCGGTCCGCA
CACATACAGG ACCATTTGAA TCCCTTTTGG GAATCCTTCA CGGTGGGACT TGAAGAGCTC
TGTTACAATG ACTTGAATTG GCCAATGCGT ATCTTAGTCA AGGATTGGCA AGCGAACGGA
CGCCACCGTA TCATTGGGCA GTTTGAAACC ACAATGAGTA ACCTGATGGA ACGAGTGGCC
GTTCGAGGTA ATGCGGATCG GCAAGCGGCC TTCGAAATAT TTCTGGATTC CTTGGGCGGA
AGCTCGGGTA AATCCAAAGG TTTCGTCTGT GTGCTCAAAG CTACCTTGTA TCCAGAAAAG
TAG
 
Protein sequence
MTRYQLSMHA EHLPRNWFHT PSPYAVATIT DGPLKGTKIG QTETLPKTTD PDWVAVLFFE 
TDSSIYMPLK IQVFDEREYN DDILLGEATF EATEIFGAAG HLKSAQLNYK GPAQLYVSVQ
TSIQGNDRGI MELQFRGLDI KNIEPGLLGL GRSDPFLELA KKNADHTAGV VRWNVVHRSA
HIQDHLNPFW ESFTVGLEEL CYNDLNWPMR ILVKDWQANG RHRIIGQFET TMSNLMERVA
VRGNADRQAA FEIFLDSLGG SSGKSKGFVC VLKATLYPEK