Gene PHATRDRAFT_46303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46303 
Symbol 
ID7201379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp870228 
End bp871076 
Gene Length849 bp 
Protein Length282 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180531 
Protein GI219119547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00242298 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTTA CCGAGGTCCC GTGCCGAACG GGTCTCGCGA TCCTCGCGTT GTTGATACCC 
GCCACGGCCT GGACGAGTCC TCCTACGACG AGACACTACT ACGGTTCGTT CGCGTCATTC
TCACGAGGGC CGGGTAAACA CCGTGCACTG GTCGAGCGTG GGGCAACCAG CATCGATGTC
TCGGTATCAA CCCAGGATCA GCCCGTACTG TTGGATTCGG AAACGCTTTT GGCCGCCGCC
GAATCCTTTA TGCAAACCAG CACGGGGTAC TATTCGGCTT TGGACGAGGA TCGTCTGGCC
GATGATTTTG TCTTTCGCGG GCCCGTAATT GGACCCTTGG GCAAGCACGA CTACGCACGC
GTGCTGGAGT ACTTTGCCGT TTACCGGGCA CTACCAGACG TGGCGCCCAA CGCCTTTGGC
TTTAGTGTGG ATCCCGAAGA TCCCCGCCGC GTTTGGTTTC TCCTCCGCGC CACGGGCACG
TACCAGCAGT CCCTGGGTGG CGCTTTGGGG AACTTGGCGG CGACCGTCAC ACCGCCCGAC
CAACGGCAGT ACCGTGGCTC GACCGAAGTT TGGAGTGTGA CTTTCAACGA ACGTCTCCAA
GTGCGGTACC TCTCGGCGGG CTACGTCGCG GACTTGTACG AACCCAACGC CACTACGGGT
GGCCGCGGAT TGACATTTGG GGTACTGGCT TCTCTCGGCC TCCCTTTACC AGCCGGTGTA
GGATCTCCCG TTCTGCAAGT GGTGCAGAAA GTTAGCAGAT TTTTGGCCGG AACCGGTATC
GTTCCCTTGC CATATTCCTC AGCGGACAAC GTTCCATCCT GGTGGAAGAG TGACAAGTTT
GGTGCCTGA
 
Protein sequence
MRLTEVPCRT GLAILALLIP ATAWTSPPTT RHYYGSFASF SRGPGKHRAL VERGATSIDV 
SVSTQDQPVL LDSETLLAAA ESFMQTSTGY YSALDEDRLA DDFVFRGPVI GPLGKHDYAR
VLEYFAVYRA LPDVAPNAFG FSVDPEDPRR VWFLLRATGT YQQSLGGALG NLAATVTPPD
QRQYRGSTEV WSVTFNERLQ VRYLSAGYVA DLYEPNATTG GRGLTFGVLA SLGLPLPAGV
GSPVLQVVQK VSRFLAGTGI VPLPYSSADN VPSWWKSDKF GA