| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46233 |
|---|
| Symbol | |
|---|
| ID | 7201193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | - |
|---|
| Start bp | 677775 |
|---|
| End bp | 679208 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180687 |
|---|
| Protein GI | 219119872 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGCC AGCGGAGACA TCTTCGTCCG GACTACGGGG ACGTTGAATA CGTTTCAACT
GGTGGTGAAG TCCGAGAAAT AAAGACATAC TCATACCTTA ACAACTTGTT GGCTATCGAA
AAAGAAAATT TTGATGAAAC GCCTAGCCGA AACTGCAAGT GGGCAGGTTG TCCGGATTAT
CGACCTTTAA ATTGTAAGCA CTTCCTTGAC TGAACTTGGA TGACTTTTGT GCTACCTGAT
GGTACTCATT CTTCTTGTTG CTCTGGACAA CTTTTAGGCA ACAGCTTTCA CGAGCTTGGG
CTCAACAACG AGAACTTATC TCACCGGTCG AACTTGCTAG GGTATGTTAA AATGATTCCG
AAAGAAAGAT GCTGAACAGT TTTACCTTGC TCAATAGCTG CTTTCGTACT CCAGTGAAGG
TGCGTATCGA GCGGCATACA GCTTAAACCT GCACATTGGC AACTTGACAG AAACAGTTGT
CTTCAAGGAA TTCAGTGAGG ATCTCAGCGA CAAGTATCTT GAATATGTTC GGATGGAAGC
ATACGTCATG AGCCGTTTGG CGTCTAGTCA ATACATAGTC GATATGTACG CTTTCTGCCA
CCTTTCAGTG CTCGTGGAAA ATTTCCCGCG AGGTGACATG AAAGAAAAAG CCGCTCCCTT
TCTGAAGCGA AAGAACGTCA CTCTATATGA CACAGTCGAT GTCAATCCAC TAAATAAGTT
TACTTTGACT CAAAAAGTAA AGTATGCTCT GGACATGGCA AGGTACGTTG ACGTTAACTG
TAAAGGCTGG TGAAGATGCG AAGATCGGAA ACTAGAATGC TAAAAAGCAG AATTGCCATT
TTTGCCGATT CACAGAGGTA TAGAAGCTAT GCACTCGATT GACCTAATCC ACGACGATTT
GAAGCTTGCA CAGTTTCTTT TGGGGAATAA CGATCATATC AAGCTCAATG ATTTTAGTAG
AACTAAAGAA CGAGTGTGGG ATCCGCTTTT GAAGCGCTTC AAAGTGTACC GGAACAGTGG
CAGACATGGC GATGTAAGTT TGTACAGCGA GAGGGTACAA TTTTCTACCT AAAAATCCTC
TTAATGTTCG GTATCGATTC TATATACCCC TTTGTGCAGT GTCGGTCGCC TGAAGAGTAC
GCCGAAAAAG AGCTGACGGA AAAGATTGAT ATCTTCTCGC TTGGATCAAT AATGTTTAGT
TTATTAACTG GTCTCATTCC GTTTGACGAG ATAACCGACG AGGAAGAGAT GATGGATAAA
TTCATGGCAG GCAAACTACC TTTCATTGAT CCGCGGTATA AAAAGCGTGA TTCAATTGAA
CGGAAGTTTG TCGAAGTCAT GGAGGATTGT TGGAAGTTTA AACCAGAGGA CCGGCCTACA
GCCGTCGAAG TTGCTCGACG ACTAGAAGAA CTGGTCATGG AAGAATCTAT ATAG
|
|---|
| Protein sequence | MPSQRRHLRP DYGDVEYVST GGEVREIKTY SYLNNLLAIE KENFDETPSR NCKWAGCPDY
RPLNCNSFHE LGLNNENLSH RSNLLGEGAY RAAYSLNLHI GNLTETVVFK EFSEDLSDKY
LEYVRMEAYV MSRLASSQYI VDMYAFCHLS VLVENFPRGD MKEKAAPFLK RKNVTLYDTV
DVNPLNKFTL TQKVKYALDM ARGIEAMHSI DLIHDDLKLA QFLLGNNDHI KLNDFSRTKE
RVWDPLLKRF KVYRNSGRHG DCRSPEEYAE KELTEKIDIF SLGSIMFSLL TGLIPFDEIT
DEEEMMDKFM AGKLPFIDPR YKKRDSIERK FVEVMEDCWK FKPEDRPTAV EVARRLEELV
MEESI
|
|---|
| |