| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46220 |
|---|
| Symbol | |
|---|
| ID | 7201187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | + |
|---|
| Start bp | 645451 |
|---|
| End bp | 646638 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180477 |
|---|
| Protein GI | 219119433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0715961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTCCCTT GGAAGCCAGT ATAGTGTACA CAGCTTGGTT TTTTGCCCAA GCGAGGAACG
ATGGGAAGCG TATCCGGCAA GAACGATAAG AGTCACGCCG TATGTGCCAG TGACCAATAC
ATTCGGCGTG CCCATCACGC TGGTTCGTGG TACGAAAACG ATCCCGTTAC CCTCCGTACA
ACGTTGCAGC AGTACCTTGA TCACGCTGCC TCGGACAGCA GTACCAAGAA CGGCCGTGTT
AATACAAGCG GTGCCGATGG GCGAATATTT CTGCGAGGTT TGATCGTCCC ACACGCGGGC
TATTCGTATT CCGGACCGAC TGCGGCCTAC GCATATCAAC CCCTTTTCCA GGAACTATCG
CGAGTCGACT GTCCCATTCA AATTTTGCTC GTGTTGCACC CATCCCATCA TGTTTACCTA
GACGGATGTG CTATATCCAA CTCCCACACA ATCAACACAC CGGTAGGGAA CTTAGCGACC
GACGATGGGA TTAGGGAAGA ATTACTCCTC CTCAACCACA ACAATAAATC TATTTTTACC
GTCATGTCAC AAAAGGAAGA CGAGGAGGAA CATTCTGGTG AAATGCAGTA TCCGTATATA
GCCCACATTC TTCAAGCATG TGGAAAACTG CACAACAATG GCAGTAACAA ACCAATTCGT
GTGCTGCCAA TCATGTGCGG AGCTCTATCG AACCAACAAG AAGCAAGCTA CGGGCACTTG
TTGCAACGTG TTATTGCTCG AGAGGATGTT TTGACAATCG TTTCGAGCGA TTTTTGTCAT
TGGGGTCCAC GGTTCCGGTA CCAACCAATT CCTACCAAAG AAAAAAGTTA CAAAGATTCG
ATGCCTCTTC ACGAATTTAT CAAATCCCTG GATCGCCAGG GCATGGATGC CATCGAGGCG
CAGCAACCGG GGGCGTTTGC AAATTACTTG GCACGCACAC GCAACACCAT TTGCGGCCGA
CACGCCATTG CCGTATGGAT GCAAGCCATT GCTGCATCCG AAACTACTAT TGGCAACAAG
GACGACACCG ATCCAACCGG TGAATTGCTG CGAGTGCGAT TTGTGCGCTA TGCACAGAGC
AGCCCTGCTG AAAGCCTACG GGATAACAGC GTGAGTTATG CCGCAGCTTT AGCCACAAGG
ACAATTGCAG CAAAACCAAA TGATGAGTCT GCTCTTTATG CTCTTTAA
|
|---|
| Protein sequence | MGSVSGKNDK SHAVCASDQY IRRAHHAGSW YENDPVTLRT TLQQYLDHAA SDSSLIVPHA
GYSYSGPTAA YAYQPLFQEL SRVDCPIQIL LVLHPSHHVY LDGCAISNSH TINTPVGNLA
TDDGIREELL LLNHNNKSIF TVMSQKEDEE EHSGEMQYPY IAHILQACGK LHNNGSNKPI
RVLPIMCGAL SNQQEASYGH LLQRVIARED VLTIVSSDFC HWGPRFRYQP IPTKEKSYKD
SMPLHEFIKS LDRQGMDAIE AQQPGAFANY LARTRNTICG RHAIAVWMQA IAASETTIGN
KDDTDPTGEL LRVRFVRYAQ SSPAESLRDN SVSYAAALAT RTIAAKPNDE SALYAL
|
|---|
| |