Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46214 |
Symbol | |
ID | 7201286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 636467 |
End bp | 637570 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180676 |
Protein GI | 219119849 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGATGA AGCCTGCCGT GCTTCGCAAT ACGGCGAGAC ATTCGACCCA GACAGAATGG GTGCCACTCG ATCCCGAGTC TCTCGTGGCT GCGCCTTGTT TGATTGAACA AACGTTGTGC GTAGCGGACG AAAGCGTACA TCAACCTCGT CGAGCAAAAG ACTTTCACTA CGCCAAGGCT GTGCTGGATG CCTGGAAACA GCAAGAATTG GATGAAGGGG ATTCCGTTTG GTCCGCTGAA ACGTGTCGCG TCCAATATGC GGCCACATAC GGAAGCGACA GTGAAAGAGA TCCAAACCCC GGGAAACAGC CATCATTACT TCACGGACAT TTGATACGCA AAGGCAGCAG TGGCGCGTTA GGTACGCAAT CCAGTACACC CCGTCCTGGT ATTTTGTTTT TTCATACGGG CGCCGGTCCA CAAGACTTAT TTTTGTTTTG GAAAGCGGTT GCGTTGGTCC AAAAGTTGGA CTGTGTCGTC TTAATAGCTG ATATTTTGGG AGATGAAACG GGTTGGGCCT GGGACGCCGA TCGGAGCCGG TACCAGCAAG CTCGGGAACA CGTGCTAGCC CAGAAGAACA CCGACGACCC CAACGACGAT GAGTCACGAT CACGACCTGA ACTGCGAGCA CGTATTCGAG CAGCGCTCGA TGTGTTGGGG AAACAAGATG AAATCGATAC GGATCGATTG GGTGCCATGG GATGGTGTTT GGGAGGATAT CCTATTCTCG AGCTAGGACA AATGAATCTT CCCAGCGTCA AGGCCATGGC CGCATTTCAT GGCGTCTTTG GCGAAGATGA ACGGGCCCAC GGCAGCAATC TGCCTTCACC GGAGGGTTCA GCTTCAGGGG AAGGTACGGC TGATATCATC ATTTGCCACG GAGTTGAGGA TCCGTTCGTG TCGAACCAGT CGTTAGAATA TGCTTTAGAA ACACTTCAAG CGCATCGCCA TCGGACGTCC CTGTTACAAC TTTCGGCCAA ACACGGATAC ACTAACCCAG CGCAAGATTT CAATGACAAT GACGCCTTTG CGTACAACGC CGAAGCCGCC AATAAGGCTT GGAATCAAGC GGTCAACCTA TTTGTGAGAA CAGTGGGTGG CTAA
|
Protein sequence | MLMKPAVLRN TARHSTQTEW VPLDPESLVA APCLIEQTLC VADESVHQPR RAKDFHYAKA VLDAWKQQEL DEGDSVWSAE TCRVQYAATY GSDSERDPNP GKQPSLLHGH LIRKGSSGAL GTQSSTPRPG ILFFHTGAGP QDLFLFWKAV ALVQKLDCVV LIADILGDET GWAWDADRSR YQQAREHVLA QKNTDDPNDD ESRSRPELRA RIRAALDVLG KQDEIDTDRL GAMGWCLGGY PILELGQMNL PSVKAMAAFH GVFGEDERAH GSNLPSPEGS ASGEGTADII ICHGVEDPFV SNQSLEYALE TLQAHRHRTS LLQLSAKHGY TNPAQDFNDN DAFAYNAEAA NKAWNQAVNL FVRTVGG
|
| |