Gene PHATRDRAFT_46214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46214 
Symbol 
ID7201286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp636467 
End bp637570 
Gene Length1104 bp 
Protein Length367 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180676 
Protein GI219119849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATGA AGCCTGCCGT GCTTCGCAAT ACGGCGAGAC ATTCGACCCA GACAGAATGG 
GTGCCACTCG ATCCCGAGTC TCTCGTGGCT GCGCCTTGTT TGATTGAACA AACGTTGTGC
GTAGCGGACG AAAGCGTACA TCAACCTCGT CGAGCAAAAG ACTTTCACTA CGCCAAGGCT
GTGCTGGATG CCTGGAAACA GCAAGAATTG GATGAAGGGG ATTCCGTTTG GTCCGCTGAA
ACGTGTCGCG TCCAATATGC GGCCACATAC GGAAGCGACA GTGAAAGAGA TCCAAACCCC
GGGAAACAGC CATCATTACT TCACGGACAT TTGATACGCA AAGGCAGCAG TGGCGCGTTA
GGTACGCAAT CCAGTACACC CCGTCCTGGT ATTTTGTTTT TTCATACGGG CGCCGGTCCA
CAAGACTTAT TTTTGTTTTG GAAAGCGGTT GCGTTGGTCC AAAAGTTGGA CTGTGTCGTC
TTAATAGCTG ATATTTTGGG AGATGAAACG GGTTGGGCCT GGGACGCCGA TCGGAGCCGG
TACCAGCAAG CTCGGGAACA CGTGCTAGCC CAGAAGAACA CCGACGACCC CAACGACGAT
GAGTCACGAT CACGACCTGA ACTGCGAGCA CGTATTCGAG CAGCGCTCGA TGTGTTGGGG
AAACAAGATG AAATCGATAC GGATCGATTG GGTGCCATGG GATGGTGTTT GGGAGGATAT
CCTATTCTCG AGCTAGGACA AATGAATCTT CCCAGCGTCA AGGCCATGGC CGCATTTCAT
GGCGTCTTTG GCGAAGATGA ACGGGCCCAC GGCAGCAATC TGCCTTCACC GGAGGGTTCA
GCTTCAGGGG AAGGTACGGC TGATATCATC ATTTGCCACG GAGTTGAGGA TCCGTTCGTG
TCGAACCAGT CGTTAGAATA TGCTTTAGAA ACACTTCAAG CGCATCGCCA TCGGACGTCC
CTGTTACAAC TTTCGGCCAA ACACGGATAC ACTAACCCAG CGCAAGATTT CAATGACAAT
GACGCCTTTG CGTACAACGC CGAAGCCGCC AATAAGGCTT GGAATCAAGC GGTCAACCTA
TTTGTGAGAA CAGTGGGTGG CTAA
 
Protein sequence
MLMKPAVLRN TARHSTQTEW VPLDPESLVA APCLIEQTLC VADESVHQPR RAKDFHYAKA 
VLDAWKQQEL DEGDSVWSAE TCRVQYAATY GSDSERDPNP GKQPSLLHGH LIRKGSSGAL
GTQSSTPRPG ILFFHTGAGP QDLFLFWKAV ALVQKLDCVV LIADILGDET GWAWDADRSR
YQQAREHVLA QKNTDDPNDD ESRSRPELRA RIRAALDVLG KQDEIDTDRL GAMGWCLGGY
PILELGQMNL PSVKAMAAFH GVFGEDERAH GSNLPSPEGS ASGEGTADII ICHGVEDPFV
SNQSLEYALE TLQAHRHRTS LLQLSAKHGY TNPAQDFNDN DAFAYNAEAA NKAWNQAVNL
FVRTVGG