Gene PHATRDRAFT_46206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46206 
Symbol 
ID7201279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp603561 
End bp604415 
Gene Length855 bp 
Protein Length213 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180671 
Protein GI219119839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000889122 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGACAGCGTG GCCTTAAAGC CATACCGCTT TTTTTGCTCT CCCTTCTCCA CGAATCAACA 
ATAAAAAATC ACATTTACGT TAGATTTCCC TGATCAAGTT TGTGATTTCA CACTGTCAAA
CACTGTCATC CAAAATGCTT CGACAAGTCA TCTTTGGTTC CTTCCTCGCA TTGTTCGCGT
CTTCGATAGC GGCCTTTTCG TTGGATCGAC GAGCCTTCGT CCGAGACGTG GCGCTTACGA
CGGCTGCGGT AGCCACCGGT GTCACTGTCT CGGCGCCCCT TCCCGCGTTT GCCGTACCGG
TAACGGGGGC TAAGGCTCCC TTCTTTGAGC TCCCCAATAG TCGAGGCAGC GGCAGCACGT
CGCTCAAGAA TCTTATCAAC TCTGGCAAGT GGACCGTGTT GTACTTTTAC CCCGGAGCCT
TTTCGAAGGG CTGTACTTTG GAAGCACGCG GTTTCCAAAG GGACATTGAG CGATACCGAG
CACTCAACGC CCAGATCGTG GGTGTCTCGG TCGATCCGGT GGAAAAGAAC GCGCAGTTCT
GCTCCGCCGA GGGACTAGAC TTTTACATGC TGAGTGATAC CGGTGGTCGG GTTTCTAACC
TGTACGGATC GGCGCTGTCG GTGCCAGGCT TTGGTATGTT CAGCAACCGC CAAACCTACA
TCATTGATCC GGAGGGTAAC TTGCGTTGGG TCTTCACCGA CGTAGAATCG CGTATCGCGA
GACATTCGGT GGAAGTCTTG GAGAAACTCA ACGAATTGGA AACAGTTAAG GCGTAGAGAC
AAACAACATC TCCTTACAAA TACAACATAC AAAAAGCACG CTCCTACAAT ATTAGAGTTA
ATCCGTAGAA GCTTA
 
Protein sequence
MLRQVIFGSF LALFASSIAA FSLDRRAFVR DVALTTAAVA TGVTVSAPLP AFAVPVTGAK 
APFFELPNSR GSGSTSLKNL INSGKWTVLY FYPGAFSKGC TLEARGFQRD IERYRALNAQ
IVGVSVDPVE KNAQFCSAEG LDFYMLSDTG GRVSNLYGSA LSVPGFGMFS NRQTYIIDPE
GNLRWVFTDV ESRIARHSVE VLEKLNELET VKA