Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46206 |
Symbol | |
ID | 7201279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 603561 |
End bp | 604415 |
Gene Length | 855 bp |
Protein Length | 213 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180671 |
Protein GI | 219119839 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000889122 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGACAGCGTG GCCTTAAAGC CATACCGCTT TTTTTGCTCT CCCTTCTCCA CGAATCAACA ATAAAAAATC ACATTTACGT TAGATTTCCC TGATCAAGTT TGTGATTTCA CACTGTCAAA CACTGTCATC CAAAATGCTT CGACAAGTCA TCTTTGGTTC CTTCCTCGCA TTGTTCGCGT CTTCGATAGC GGCCTTTTCG TTGGATCGAC GAGCCTTCGT CCGAGACGTG GCGCTTACGA CGGCTGCGGT AGCCACCGGT GTCACTGTCT CGGCGCCCCT TCCCGCGTTT GCCGTACCGG TAACGGGGGC TAAGGCTCCC TTCTTTGAGC TCCCCAATAG TCGAGGCAGC GGCAGCACGT CGCTCAAGAA TCTTATCAAC TCTGGCAAGT GGACCGTGTT GTACTTTTAC CCCGGAGCCT TTTCGAAGGG CTGTACTTTG GAAGCACGCG GTTTCCAAAG GGACATTGAG CGATACCGAG CACTCAACGC CCAGATCGTG GGTGTCTCGG TCGATCCGGT GGAAAAGAAC GCGCAGTTCT GCTCCGCCGA GGGACTAGAC TTTTACATGC TGAGTGATAC CGGTGGTCGG GTTTCTAACC TGTACGGATC GGCGCTGTCG GTGCCAGGCT TTGGTATGTT CAGCAACCGC CAAACCTACA TCATTGATCC GGAGGGTAAC TTGCGTTGGG TCTTCACCGA CGTAGAATCG CGTATCGCGA GACATTCGGT GGAAGTCTTG GAGAAACTCA ACGAATTGGA AACAGTTAAG GCGTAGAGAC AAACAACATC TCCTTACAAA TACAACATAC AAAAAGCACG CTCCTACAAT ATTAGAGTTA ATCCGTAGAA GCTTA
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Protein sequence | MLRQVIFGSF LALFASSIAA FSLDRRAFVR DVALTTAAVA TGVTVSAPLP AFAVPVTGAK APFFELPNSR GSGSTSLKNL INSGKWTVLY FYPGAFSKGC TLEARGFQRD IERYRALNAQ IVGVSVDPVE KNAQFCSAEG LDFYMLSDTG GRVSNLYGSA LSVPGFGMFS NRQTYIIDPE GNLRWVFTDV ESRIARHSVE VLEKLNELET VKA
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