Gene PHATRDRAFT_46192 details

Gene Information

• Locus tag: PHATRDRAFT_46192
• ID: 7201264
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011677
• Strand: -
• Start bp: 529463
• End bp: 532978
• Gene Length: 3516 bp
• Protein Length: 1171 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002180662
• Protein GI: 219119820

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.320112
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAGA TGAACGAAGC CTTGGCGGTA GCTTTGAGCA GCAACGGCGC CGGGAGTAGC 
GTCCGGAGTA GAGGCCCAAA GCCCAAACAT CCGCACAACC AAACGATTCA AGTCAAAATC 
GGTTCACACG CACCGCAGTC CATGACACCG GATCAAGCCG CCGAATACTT AAAAAGCATT 
GCCAATACGG GAGGCTTTGA CGGAAGCTCG TCGGGCGCAG GTAGGGATGT TAAAATGACC 
TTTGGCAAGG GACCGACGGC AGCGTCGCTG ACGACGGAAC TCGCTGCCGC TGTGTCGTCC 
CTCGGAGGCG GGAACATTCT CCACAACTAC GCGACGGCTG CGGACACGAA CGCCGCCGTC 
GGTACCGCCA TTCCCTTTGG TCCCAGACGA TCTATTTGTG GTGACTCGGA ACACGCCGAC 
TTTGTTTTCT CCTCCAACTC GGCGCTTTCG ACCCTCGACT TCGCCGCCTT GGCAGCGGTC 
GGTGGCGCCG ATTTGCCCCA CAAACGGAAA GACGGTGCAC CCTGCACGGA AAAGGAAATG 
AAAGCGCTCA TGAGCATGTT TGTAGAAATT ATGGGACTGC AAATGAAAAC CGATCAACTG 
CAACCGCCGA TGCACGTTCG GGGTGATGTG CTTCAGGCAT TCCCGTCGCA GTGTGCACCA 
CCCCCATCCG GTTGGCCGGA AGAGCTGCTC TACCCCGCGT TACCGCCGAC TTTGAATGAT 
GACGACTCTT TGCCGGATCT AGAAGAAGCA CCTGTGTGGT CGTTTGCGAG TCTAGGAAAA 
TTGACGGCAC TCCTGGAGCA AACGCCCCCG GTACCCGAAC GATTCAACCC AGCTTCCGGT 
ATTGAACGTT TGAACTGGGA CTTGTTGGAA CGGTTTGCCA TGGAAGATGC CTTGGAACAG 
GAAGAGCGAG CTCGCAAGTC GGCAAAGTAT GTGTCACAAC AGCAATCTGC GTCGCGACAA 
GCCTCACAAG CTCGATCGGA AGCCGAAGCG GTGGCGAAAC GACTCGACAA GGTCTTCCAC 
GCGTGGCGCT CCAAAGTAGT CAGCGCAATC AACGTAAACG ATGTTGACGC GTTGGAAGTC 
CTACTGGTGA ATTCTCCCTC TGTTAATGAC GAGAGAGTTG CCAAAACGCA CTGGCGGGCT 
TTGGCTCCAC AGCTTTTGGC CAAGAATCGG CAAACCTTGC CCAAGAATAG ACAAGCGCGG 
GTGCTGCTGG CCACTCTGTT GGGACGCAAG TCGATAGACT TGCTATCAGA ACCTCAACGG 
AATGGGCGTA GTGTACTGCA TACGGCTTGC TTTCATGGTG ATATAGCTCT GGTTCAGGCA 
TTATTGTCAT CCTGGGGCAG TGCTTCTGAG GGTTCGGATG AAAAACAGAA AAAAATCAAC 
GTTCGCTGTC AAGATTCGGG ATGGACACCG CTGCAATATG CTGTCGCGTC CGGATCAATG 
CGTGTTGTCG AACTTATACT TCAGCACGGA GCCGATATGC TGGTGCCAAC GAACGATACA 
CACACTTGGA AGCGACAAGG AAAGGGTGGT TTGACCGCTG TGGAACTAAC CGACGTTATT 
CGTAAGCAAG CATGGAGTAA ACAGATTGAA AGTCATGGTA TGGCGCTCCC GGAAATTACC 
AAGGAACTTT TGTCGGGCAC CGAAGCACGG CTCTATCTAG AGCGTTTGGC ACAAATTGCG 
CATCGCTTGC GTGAGGTGGC GTCGCAAGGC AACAGCATCG AGCCACTGTC AGAAAAGCAA 
TTGAGCAAAC TTGAAGAGCA AGTCCGTCAG CAGGCTACAA AAACGCGCAA GCCAGAAGCC 
GGTTCAGTTA CCAGCAACGA TGGCAGCCTA CGCAAACAAG AGTCCATGGC CAGCAATACG 
CCCCAGAGGT CGAGTTCTAA AGCGCAAAAG AATTATGCTG AAACTCTACC GGTATCGAAA 
ATCGACACGA AAAACATAAC AGAACCTGTG ACAAAATCTG TACCAGAAGA TCCAATGATT 
TCTGCCCTAA TAGGTATGGG ATTTGTACGA GATCAAATTA TGAACGGTGT TCACGCTTGT 
GGAGGCATGG ACCGAGCAAC AGCGGATGAC GTTGTGGCTT GGATTTTTGG ACAAGATACA 
AGTCCAGCTG CGCCTGACGA ATCTCCGAAA ACAATAGAGG ACCAACCCGC GTCTCAGATT 
TCCGGTGGTA TCCAATCTCG TGATTCGCTC CGGCATGCGC GAGCCGCTAA CGCAGCTGAA 
GTTAACCGTT TGACAACTTT GCGTAAAGCC GAAGAAGAAA GACTTGCCGC CGAGCGACAA 
GCCGCCCACC GGGAAGAGCA GCGTCGGAAA AATCGGGAAT GGAACAATCG ACAAAAGCGA 
CAGGTGCAGA CAGCCACAGC CGCGGATGTC AAGAGATCGT CAGGTGGATT GGAGGGTAAG 
GCCTTGCCTC CGAGATCGCT GTCGAAGCAG ATCTCCGGCA TGCCTGATAA AGGACCCATC 
CCGGCTGCCA TGTCGGCGAT GGCTACTGCC CCTACATCGA CTTGGGTTAA CAGGGAAGTT 
CGAGAAAATG GAAACGATTC CTCGACGGTC AATTCGTTTA ATGAGATTAC AACCATTGAG 
ATCTACAACA ATGACGACGC AACAGTATCG ACTATTGGGA GTTTGCAAGC CCGTGCTACT 
TCCATTCCCG TTCCTTCATC ACAGCCAGTC GCTCCCCCTG GCTTTGGGTT AACCGTTCCG 
GCTGTTCCGG AGGCGATGGA AGCAACGCAT CCATGGGGCT TGACGCCAGC TGGGGTCCCT 
CATCTACCTG GAAACGATGG ACCGGGGTGC TTTCTTCCTC CTCCAGGGCT CTCCGCCGAC 
CTGAATAGTA TGCAGCATCC AGCAATTTCA GGAGCTAGCG AGCGTCAATT CCCAATGAAG 
AATGATCCTA TGGCGGGAGG AAGCATTTCC CGTTCTGCGG ATTCTTTCAC TAGATTCGCG 
ACTGGGAACA ATGGCACAGG TCTTTTGGGG AGTCATTTAA TGTCCACGAC AAATCCACCA 
GTAGATCCAT CGTTGCTCTT TTCCGACTCG TTGACCGGTA ATTCCTTTCG GAACAATCTT 
TCGCAACAAA CTTGTCTACC GCCGTTGCCC TCGCAATCTT TCACAAACGG ATCGTCGTTT 
TCTGGTCCGA CGTTGCCATC ATCTTTGGGT ATCGGTCGGA GTGGGTTACC GAATCAAGCC 
GCTCACCTAG ACTCATCATT CATCGAATCC ATTTCTACGG GTGATCCCTT GCTGGATGGA 
GCCTCCCTGT GGGGCGGCAT CGATCCCCAG TCACAATCAC CGTCGGTGTT GCACAACTTG 
CTACACGAAG ATTTAAATCA TGACGGCATC TTTCCAGCTC CGCAAACTTC GGAACAAGAA 
AGAAGCTTTG CGACATGGGG GACAAATCAG CAACAATCTC ACGCTAACCT GCATCTCCTT 
CACCAACGAC CTACAGCTAA CTCGCATCAA CAACCGCAGT CTCTAAACGT GGCAAGTACT 
ATGCAGCGAG ATAACCGTGG CAGGTCCATA TGGTAA 

 

Protein sequence

MEEMNEALAV ALSSNGAGSS VRSRGPKPKH PHNQTIQVKI GSHAPQSMTP DQAAEYLKSI 
ANTGGFDGSS SGAGRDVKMT FGKGPTAASL TTELAAAVSS LGGGNILHNY ATAADTNAAV 
GTAIPFGPRR SICGDSEHAD FVFSSNSALS TLDFAALAAV GGADLPHKRK DGAPCTEKEM 
KALMSMFVEI MGLQMKTDQL QPPMHVRGDV LQAFPSQCAP PPSGWPEELL YPALPPTLND 
DDSLPDLEEA PVWSFASLGK LTALLEQTPP VPERFNPASG IERLNWDLLE RFAMEDALEQ 
EERARKSAKY VSQQQSASRQ ASQARSEAEA VAKRLDKVFH AWRSKVVSAI NVNDVDALEV 
LLVNSPSVND ERVAKTHWRA LAPQLLAKNR QTLPKNRQAR VLLATLLGRK SIDLLSEPQR 
NGRSVLHTAC FHGDIALVQA LLSSWGSASE GSDEKQKKIN VRCQDSGWTP LQYAVASGSM 
RVVELILQHG ADMLVPTNDT HTWKRQGKGG LTAVELTDVI RKQAWSKQIE SHGMALPEIT 
KELLSGTEAR LYLERLAQIA HRLREVASQG NSIEPLSEKQ LSKLEEQVRQ QATKTRKPEA 
GSVTSNDGSL RKQESMASNT PQRSSSKAQK NYAETLPVSK IDTKNITEPV TKSVPEDPMI 
SALIGMGFVR DQIMNGVHAC GGMDRATADD VVAWIFGQDT SPAAPDESPK TIEDQPASQI 
SGGIQSRDSL RHARAANAAE VNRLTTLRKA EEERLAAERQ AAHREEQRRK NREWNNRQKR 
QVQTATAADV KRSSGGLEGK ALPPRSLSKQ ISGMPDKGPI PAAMSAMATA PTSTWVNREV 
RENGNDSSTV NSFNEITTIE IYNNDDATVS TIGSLQARAT SIPVPSSQPV APPGFGLTVP 
AVPEAMEATH PWGLTPAGVP HLPGNDGPGC FLPPPGLSAD LNSMQHPAIS GASERQFPMK 
NDPMAGGSIS RSADSFTRFA TGNNGTGLLG SHLMSTTNPP VDPSLLFSDS LTGNSFRNNL 
SQQTCLPPLP SQSFTNGSSF SGPTLPSSLG IGRSGLPNQA AHLDSSFIES ISTGDPLLDG 
ASLWGGIDPQ SQSPSVLHNL LHEDLNHDGI FPAPQTSEQE RSFATWGTNQ QQSHANLHLL 
HQRPTANSHQ QPQSLNVAST MQRDNRGRSI W