Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46165 |
Symbol | |
ID | 7201374 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 458148 |
End bp | 459173 |
Gene Length | 1026 bp |
Protein Length | 272 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180641 |
Protein GI | 219119777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGGA GGAGAGGGGG TAGAAGGGAA AGCACAGCTT CGTGCCCAAA TCCGTTCAAT GGTCATGATA TCCAAGGAAC GTCTACGAAG CAGGTGTACC AGCGTGTACG ATCCATAACA ACGTTCAATC GCCGGCGCGA TCTTAAAGGA ATTATGAAGT TTGCGACCGC GGACGACAGC ATCCATTCCA CATACGGAGC GACCGAAAAA GAGTCAAAAG ACTCGACGGA CGGCGAGTTG TCTATCAAAC GAAACATCGA ATTCAAAGAA CTACATATTC GCGAATATGC ACGTACACTT GGAGATAATC CGTCCTGTTC AAGTGGCCCT CCCGTATCGT GAGTAAATTA CACGTTGACA ACTGACTAGA ATACATTCTA GACGTCAAGG ACTGTGCTTA TTTTACTGTT TGTTTTCTTC ATATACAGTA TTTCGTGGGA ATTTGACCCC GAGACAAAGA TCATTTCGGT GGACGAATAT GAAGACACGC GACCGCCCCG CCGGACGCAT TTTGAAATGA TTTTACCACG CGACTTACGC CAGTCTATGC TACGCAAGGA ATGGGACATT ACCCAACTGC AAATTGCTGC CGCCGTCCGG GCAAATATCA AAGCGAAGAA CCAACGACGA TCGACGGTCA ACAACATTGG AAAGGCGACA AAAATTGAAG AAATGATGGA AAAAGCAGGG AAGAAGGTAA GGCGAGGATT TCTTTTGAAG AAAAGTACGA CAAAGGAAAT GGAGGAGCTT GAGCAGAAGA TGCAGGAGGC AGACATTGCA CGAAAGCAGG AACAACTGGA CTCCCAGATG GCGGATGAAT ATTCCGAAGA GGAGAGCGAG CCGCACATGG ATCAACCTTA CAGCAACGTT GACGCATTAA GTTTTAGTTC AAAGAACCAG GAATTTTGAA GCGTTGAATT CAGTCGCTAT GAGAAAAACT CCGAGACAGA AGCAGCAAAA GCCAGCTCGG TTGCTTTCGA AGTTTGATCA GTTTTTGACG ACTTTGAGTT TTCTCATCAA TCGATT
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Protein sequence | MFRRRGGRRE STASCPNPFN GHDIQGTSTK QVYQRVRSIT TFNRRRDLKG IMKFATADDS IHSTYGATEK ESKDSTDGEL SIKRNIEFKE LHIREYARTL GDNPSCSSGP PVSISWEFDP ETKIISVDEY EDTRPPRRTH FEMILPRDLR QSMLRKEWDI TQLQIAAAVR ANIKAKNQRR STVNNIGKAT KIEEMMEKAG KKVRRGFLLK KSTTKEMEEL EQKMQEADIA RKQEQLDSQM ADEYSEEESE PHMDQPYSNV DALSFSSKNQ EF
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