Gene PHATRDRAFT_46165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46165 
Symbol 
ID7201374 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp458148 
End bp459173 
Gene Length1026 bp 
Protein Length272 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180641 
Protein GI219119777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGGA GGAGAGGGGG TAGAAGGGAA AGCACAGCTT CGTGCCCAAA TCCGTTCAAT 
GGTCATGATA TCCAAGGAAC GTCTACGAAG CAGGTGTACC AGCGTGTACG ATCCATAACA
ACGTTCAATC GCCGGCGCGA TCTTAAAGGA ATTATGAAGT TTGCGACCGC GGACGACAGC
ATCCATTCCA CATACGGAGC GACCGAAAAA GAGTCAAAAG ACTCGACGGA CGGCGAGTTG
TCTATCAAAC GAAACATCGA ATTCAAAGAA CTACATATTC GCGAATATGC ACGTACACTT
GGAGATAATC CGTCCTGTTC AAGTGGCCCT CCCGTATCGT GAGTAAATTA CACGTTGACA
ACTGACTAGA ATACATTCTA GACGTCAAGG ACTGTGCTTA TTTTACTGTT TGTTTTCTTC
ATATACAGTA TTTCGTGGGA ATTTGACCCC GAGACAAAGA TCATTTCGGT GGACGAATAT
GAAGACACGC GACCGCCCCG CCGGACGCAT TTTGAAATGA TTTTACCACG CGACTTACGC
CAGTCTATGC TACGCAAGGA ATGGGACATT ACCCAACTGC AAATTGCTGC CGCCGTCCGG
GCAAATATCA AAGCGAAGAA CCAACGACGA TCGACGGTCA ACAACATTGG AAAGGCGACA
AAAATTGAAG AAATGATGGA AAAAGCAGGG AAGAAGGTAA GGCGAGGATT TCTTTTGAAG
AAAAGTACGA CAAAGGAAAT GGAGGAGCTT GAGCAGAAGA TGCAGGAGGC AGACATTGCA
CGAAAGCAGG AACAACTGGA CTCCCAGATG GCGGATGAAT ATTCCGAAGA GGAGAGCGAG
CCGCACATGG ATCAACCTTA CAGCAACGTT GACGCATTAA GTTTTAGTTC AAAGAACCAG
GAATTTTGAA GCGTTGAATT CAGTCGCTAT GAGAAAAACT CCGAGACAGA AGCAGCAAAA
GCCAGCTCGG TTGCTTTCGA AGTTTGATCA GTTTTTGACG ACTTTGAGTT TTCTCATCAA
TCGATT
 
Protein sequence
MFRRRGGRRE STASCPNPFN GHDIQGTSTK QVYQRVRSIT TFNRRRDLKG IMKFATADDS 
IHSTYGATEK ESKDSTDGEL SIKRNIEFKE LHIREYARTL GDNPSCSSGP PVSISWEFDP
ETKIISVDEY EDTRPPRRTH FEMILPRDLR QSMLRKEWDI TQLQIAAAVR ANIKAKNQRR
STVNNIGKAT KIEEMMEKAG KKVRRGFLLK KSTTKEMEEL EQKMQEADIA RKQEQLDSQM
ADEYSEEESE PHMDQPYSNV DALSFSSKNQ EF