Gene PHATRDRAFT_46134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46134 
Symbol 
ID7201233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp365638 
End bp366606 
Gene Length969 bp 
Protein Length322 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180623 
Protein GI219119739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGCCA TCGTGAAGAA GTTTTATCAA CCGCTATTGA TCCAGATCGT GCTAGTGCTG 
CTACGGGGAA CAAAGCCGGC AAACGCTTTG CTAGGTAATC TGTTCCCTCG TATTGGCCCT
CCTCTCGCCA ACGAGAATAG AGATCCATCC AAAAACTTTT ATTCGGAAGC GACTGTAGCC
GCAGAGCCTC TCAGCATTCG GATACGTTCC ACTTCCGCTT CTGATTTAAG TACAGTCGCT
GCTCTGCTTT CGACAGCCTC TGTTGGTAGT CCCAAGGGCC TTGGGGCTCA TGCATTCAAT
TGGCGACAAA AGATGGACGC ACTCTGGGCA AAAGCGGACA TTGAAGCCTT GCTACGGGTT
CGTCTCGAAG CACTCCACGA AGGACGAAAA CGCCTGCACC ATTTACAAAG CATCCCGGAC
TTGGAAGAGC AGGATCGGCT ACGACTACTG TGGTCCAACG AGCGCTTGCG CAATCGAATT
GCTACCGCAT CACGGCAAAC CGGCGAATCC AACGTCTGGC AGTCTCACAA TTTTGCGCTG
ACCCCCGACG ATTCGTCGTG GATGAACCAC GTACAAATGA CGGCAGAAGA CGTTAGCACG
GGTCAAGTAA TTGGCTTTTG TGAAGTGGCC ATGCTGAGTA ACCCAGTTGC AATTCTGGAG
AACGACGATG GGGAATGTGT GTTTGGATAC TCTCCAGCTA TCACAAACTT GGCGACCGAT
CCAGACTTTC GTCGACAAGG TGTGGCCACT CGATTGCTCC GCACGGCAGA ACGCGTTGTA
CGCAGAAAGT GGCAAGCAAA CTCTATTGGT CTCTACGTGG AAAAAGAAAA CAAAGGAGCT
CTGGCCTTGT ATAGATCGAG AGGATTCGAA CCGAAAAAGC CATGTGAAGG GGGAGATCGA
CTCGGAGAAA TGTGGTACAT GATGCGCTCA TGGGAGGAAA CCAGTGCTCC TTTACAGATA
GAAGGTTGA
 
Protein sequence
MGAIVKKFYQ PLLIQIVLVL LRGTKPANAL LGNLFPRIGP PLANENRDPS KNFYSEATVA 
AEPLSIRIRS TSASDLSTVA ALLSTASVGS PKGLGAHAFN WRQKMDALWA KADIEALLRV
RLEALHEGRK RLHHLQSIPD LEEQDRLRLL WSNERLRNRI ATASRQTGES NVWQSHNFAL
TPDDSSWMNH VQMTAEDVST GQVIGFCEVA MLSNPVAILE NDDGECVFGY SPAITNLATD
PDFRRQGVAT RLLRTAERVV RRKWQANSIG LYVEKENKGA LALYRSRGFE PKKPCEGGDR
LGEMWYMMRS WEETSAPLQI EG