Gene PHATRDRAFT_46130 details

Gene Information

• Locus tag: PHATRDRAFT_46130
• ID: 7201230
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011677
• Strand: +
• Start bp: 354001
• End bp: 354788
• Gene Length: 788 bp
• Protein Length: 238 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002180420
• Protein GI: 219119314

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAACACCAAT CGACAGTGAT AAAGGCACCG AAAATATCAC AATGGAAAAA GCTCCACCTT 
CAATTTGCAA ATGGATACAA ACGCTGGAGC TGGGATATTC GGATGTGGAC AAGCCTCCCG 
ATGGAGGAAT TTGCTTCCAT TGCGCAGGAC GTCATGCCAA GCTTCTCAAG TGTGCTCGAT 
GTAAAGTAGC CACGTACTGC CAGCGGGATT GTCAGGTAGA AGATTGGAAA ATCGGAAAAC 
ACAAGCTTGC CTGTCAATCT TATGCAAGGG TAGGGCCTTC GATGCAAATT GACGACGAAA 
ACGACAAGCA GCAAGCCTGC AATGAGTTGT TTGGCCGAAT ACGATTTTAC GTGTGCCCGT 
ACGCTGTCCA CAAGGCGACG ACACTTGGAA GAGGATTTCT CTTTATTCAA AGCGACCGCA 
CACTCGCAAC CATGTCCTTA ACTTTGCCAA AGGATAGCTA CGGTCGTCCA ACCGACAATC 
GAGCTCTGTT GATATATTAC CTCACTCTCG GTGAGTTTGA TGCGGAAGTT TGTCGAGAAG 
ACTTTGAAAT GGCTACAGTT CGCACAAAAC TTCAAGAAGC AGTTGAAAAC TACGATGAAG 
AGGACGAAAT TGTCATTTTG ATGCGCTTCA GGTGTGGCCA TGTCTCCCTG GGCACGTCTG 
CGTTGGTTCC AGACCATCGG GTATGTAAAA AGCTCGGAAT TGACTACTAC TCCGAAAGCA 
CTGCAGCGGC CCTTCAGCTA AACATAGACG ATAGTTAATC ATATCTGACG GTCGGTGTTT 
CGGTTACG 

 

Protein sequence

MEKAPPSICK WIQTLELGYS DVDKPPDGGI CFHCAGRHAK LLKCARCKVA TYCQRDCQVE 
DWKIGKHKLA CQSYARVGPS MQIDDENDKQ QACNELFGRI RFYVCPYAVH KATTLGRGFL 
FIQSDRTLAT MSLTLPKDSY GRPTDNRALL IYYLTLGEFD AEVCREDFEM ATVRTKLQEA 
VENYDEEDEI VILMRFRCGH VSLGTSALVP DHRVCKKLGI DYYSESTAAA LQLNIDDS