Gene PHATRDRAFT_46119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46119 
Symbol 
ID7201451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand- 
Start bp312869 
End bp313636 
Gene Length768 bp 
Protein Length158 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180613 
Protein GI219119718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.726728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAA GACACACGGG ACGGGTATAT ACCGTGAGAG ACACTCCCGA AGACACTGAC 
GACTCGCTCT ACTTAGTCTT ACAGTTAATG ATTGTCTTTT TGACGCCAAG TGCCAAACAC 
GTCATGGTCA ACCTCAGCAG CAGCGGCATC AAGGAAGGCT TTGCTTCCGT CATTGCCCTC 
CAGGACGCTG GGGCGCCGCT GATTTGTCAG TCTCACCATG ACCATTGCAA TTGGGATTGG 
CAATGCTTGT TCCTACCCGG GCGCCACCGC CGGCCGCCGC TGCACTTAGG GAAAGAACAA 
ATTCTAATGT GGCACCTTGG ATCCGTGGCG GCAGCTTGCC CTCCCCAGGA TCCTGCTCTG 
GGAAAGGGAC TGCAGCAGCT GGCCATTTTA TCGCAAATGG TACATGCCTG TGCGGACCTT 
CACCGACAAG GTCCGAGTCC TGGCCGAAGC CAACTTTGGT GTGATATACC TATGTAGTAT 
GTCACAGCAT CTGTAATTCA ATCTTGTGTT ACGTCTCATC ACGTCCTGTT TGGAACGTAA 
GGTAAATATT ACGGTGAGAT TATCTCACTA TCGGTTTGTT CAGACCCAAT GCAACAGGAT 
TGACTAGGAA TACTAACCAT GGGATTATAT GTGGGATTTC TATTTACAGT AAAAGAGACA 
CTACTTACAG TTAGTGTGAT TTTCAGTCTT CTGGTAAGGG GTTGTTCATT GGACTGAACA 
GACCAATTCC CATTAAAAGA CATAGAATAG TCTTCCCCTC ATTGTTTT
 
Protein sequence
MSQRHTGRVY TVRDTPEDTD DSLYLVLQLM IVFLTPSAKH VMVNLSSSGI KEGFASVIAL 
QDAGAPLICQ SHHDHCNWDW QCLFLPGRHR RPPLHLGKEQ ILMWHLGSVA AACPPQDPAL 
GKGLQQLAIL SQMVHACADL HRQGPSPGRS QLWCDIPM