| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46109 |
|---|
| Symbol | |
|---|
| ID | 7201445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | - |
|---|
| Start bp | 288291 |
|---|
| End bp | 290659 |
|---|
| Gene Length | 2369 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180609 |
|---|
| Protein GI | 219119710 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGGCTGGTAG TAGCTCTTGG TGCAACTTGC GCTCGTTACT GATTGGGTTT GTGGCGATGC
AGAGTTTGAA TTTGACCGTC AAAGTGATTC GTCACGTCTC CCACGAAGCG CCTCCAGCTC
CGGCAGTAAT GAAGGTCCGT GAAGAACCGG CGGTTCCGAA ACCAAAGCAT GATCACGCAC
CCAATCCACT GCACGCTTCG CGCCACGAAA ATCATCAGCC AAAGTCGGAT AAGCTCAAGG
CACCGGTGGA ACGAGTGGAC GAGACGGCTG ACGAAAAGCA CGACTCGGAC ACCGAAACAG
GAGACGATCC CGTTGTCAAG CCGCACGAAA TATTGCCTCT TGTCGTTGAG GAGGAAAGAG
AGGACCGTGA AAAGGAATCT CCAATGCAAC CGGTAGACTC CGCAGTGCTG GATCCGGAAT
CTACCCAAGT CTTACAAAAA CACGGCACGG GTGCCACGCT CTTGGGCTAC GTTGTGGATA
TGGTCCAAGA ACGTGCGCAT CCCTCGTTTC GCAAACTCCC CGTTTCTATT CGGCCCGATA
CTGCCAAAGT CGCGTCACTT GTTGGCGAAG CCTCTGTCCA AGCCTGTGAG AGTGTCGTCG
CCCAGAGCAA CGACAATCCG GAGGCCCGTC CTAGTATTTC CCAAAATCCC CACTGTCGTG
ACGAAGACAC GGTTTTGGTC GTATACAACT CTGCCACTTT TTCCCGACGC TACTGTGGGA
AAACGATTAA GCCGGGACAA GCCCTTAAGC TTGATCAAGA CATGGATGAC CACTGCCGCC
TAGAGCTGCC GCGTGTGTTT GCTGTGGATG ACCCTCCACT GGATGGACAG GGCATGGCGC
CCATTATCGT GCAATCGAAG GCAACGGCAC AGCAAGAGAC GGCACTGGAA GACTCAGAAC
TAGAAACAGT ACCGTGCAGC ATTCCGTGTC AGTGGGAAAA GGATATATCG GGCAAAGATC
TGGTGATTGC TGGCACCACT TGGCAACTCC ACCAAACAAT GGACGATCCA TATTTCCACG
ACGACGCCAA AATTGAACGT ACAGATTTCC GTTCCGACAA ATACTACTCG ACCACCTCGC
TACGCTCTTC TATTCCCCTT ACCTTTTATG ACAGCTCCAA ACACTCCTTA CGAAACCGTC
CCGCTCTCGA TTGGGCCAAC ACGGCCAACG CCGCCACGTA CGTTCTCAAT AGCAACTGCC
AAACCCAAGG GACCCGTCGC CAAAAGTGGT TGGCCGCTGT CCAAGCAGTC TTCCGCGTGG
CAGCCTATGG ATCATGTCAA CACAATACCG ACCTGGCGCC GGGAGAAACG GTGGACACAC
TGGAGGGTCG TTTGGCGCTT TCCCGAAAAA ATCGTATCCA CCTTGCCTTT GAAGCTGCGT
CGGAAAAGGA CCATTTGACA GACGTGTCTT TCGAGGCACT ACTCTCGGGG GCCGTCCCGG
TACTTTTGGG CCCCTCCAAC GCGAATCAAC TGTTTCCTCC CCACTCGGCC ATTTTTGCTT
CAGACTTTAA CAAATGGGAT GCTTTGGCAG CCTACGTCAA GGAGGTGGCG GAAAATCGCA
CACTGTGGGA ATCCTTTCAC ATATGGCGAA CAGATGAGAC CGTACTACGA ACTTGGGAAT
CTCGCTGGGC CTTTGCCGAG ACGACAGCCT CTACAGCTAG TCCACAGTGT CGAACCTGTC
GGTGGGCATA CGCCAAAGAA TTCGGTTTAG GTTGGAACCA CACCGCGCAG ACCATCCAAC
CAACACATTT GCCACGGGAT TTGTGTCTGG ATCCAACGTC AAAAATCGTG ATGAAACCCT
TCCGGGAATA TTGGGTACAA CGGGGATCCC AATTGGAGGA CATTGAGGTT GACACGGGTG
ACGGTTGTTC GAAACCCATG TCTTCTTCCA CCATTGAAAT GGATGGGTAC AAGGTTGAAC
GCGAGGTTTC CGAACACGAT GGAGTCGTAG ACATTGTGGT GCAGAGCGTA GAGAAGGAGT
CTGTCAATGA ACCTGTGACG CTGCGATTGC ACGTAGACGT GCGCAATTCC GAGGGCGCCT
ACTTCCGCAA TCCACATACA TTGGTGTCTA CAAGTCGTGG TCCTTGGATC AGTAGCGCCG
CAATACAGGA CGAATTTTCC AAGGTAACCG TATTGACCTC TTGGGAGACA AGCGTTCACA
GTCCGCAGGA AGGAATCCTG GAAGTATCGA TTTTGAAGGA AAACGAATCT TTCCCTACTA
ACAACGACGG AGTCCGGCGG ATTCGCGTAA TACTCGAGGA TGTCAACATG CTGCACGACA
AGATGACCGA ACATTTTCCG TCATCGTACG CGAAAGTAAT GATTCAGGAC TTTGTCGATC
CACTCGAGTT ATTTTACGTA TCGTCATAG
|
|---|
| Protein sequence | MQSLNLTVKV IRHVSHEAPP APAVMKVREE PAVPKPKHDH APNPLHASRH ENHQPKSDKL
KAPVERVDET ADEKHDSDTE TGDDPVVKPH EILPLVVEEE REDREKESPM QPVDSAVLDP
ESTQVLQKHG TGATLLGYVV DMVQERAHPS FRKLPVSIRP DTAKVASLVG EASVQACESV
VAQSNDNPEA RPSISQNPHC RDEDTVLVVY NSATFSRRYC GKTIKPGQAL KLDQDMDDHC
RLELPRVFAV DDPPLDGQGM APIIVQSKAT AQQETALEDS ELETVPCSIP CQWEKDISGK
DLVIAGTTWQ LHQTMDDPYF HDDAKIERTD FRSDKYYSTT SLRSSIPLTF YDSSKHSLRN
RPALDWANTA NAATYVLNSN CQTQGTRRQK WLAAVQAVFR VAAYGSCQHN TDLAPGETVD
TLEGRLALSR KNRIHLAFEA ASEKDHLTDV SFEALLSGAV PVLLGPSNAN QLFPPHSAIF
ASDFNKWDAL AAYVKEVAEN RTLWESFHIW RTDETVLRTW ESRWAFAETT ASTASPQCRT
CRWAYAKEFG LGWNHTAQTI QPTHLPRDLC LDPTSKIVMK PFREYWVQRG SQLEDIEVDT
GDGCSKPMSS STIEMDGYKV EREVSEHDGV VDIVVQSVEK ESVNEPVTLR LHVDVRNSEG
AYFRNPHTLV STSRGPWISS AAIQDEFSKV TVLTSWETSV HSPQEGILEV SILKENESFP
TNNDGVRRIR VILEDVNMLH DKMTEHFPSS YAKVMIQDFV DPLELFYVSS
|
|---|
| |