| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46080 |
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| Symbol | |
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| ID | 7201426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | + |
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| Start bp | 189448 |
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| End bp | 193661 |
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| Gene Length | 4214 bp |
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| Protein Length | 1370 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180388 |
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| Protein GI | 219119247 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGAAATCAGG GATGTACTTG TTACATGAAC TCTGTACTTC AGCAGTTATT TATGATGCCA
GAGCTACGGG ATTCAATGTG TTCAGCCCCT TTACCGAGGT CTCTCCGCTC TTCAGGGGGC
TCTACGGTTT TAGTCGGAAA TGACCTTGTC GGGAAAAAGA TTTCGCTGCA ATGGGACACA
GGTATTTCAT ACGATGCTTT TGTTGAAGGC TTTAATGACG TCACTGGTAT GCACATTATC
CGATATTGCC CGATACAGAT TGCCACGGTT GGTGGTTCCA CAATACATCA GATTCAACCG
GAGGACATTG ACAGCCTGCC TCCAGTCCTA CCGGAAGAGT TCATTCTTAC CGAAGGACGC
TCCGGTATGG AAACCGGCGT CTATGACGTT GTATCAGATG TATCTGAAAA TTTAGACGGC
AATGAAATGT CCTCGAAAGC AATCAACACG ATCCAAGAAA CGGAGGACGA GAAGACATCA
CGACACCTGT TGGAAGAGTT CCAACGAACA TTCATTCACT TACAAGAGGG ATCGAAAGGT
CGCTGTTTCG ATCCACGCAC TCTCGTGGAG GCTTGCGCCT GTCTAAAGCT GGAGTTCGAC
GTTTGGCAGC AGAATGACGC TTCTGAATTT GCCACTAAGC TTCTTGACAG ATTGGAGATC
GCATTGAGAC GTTGGGCCCC TGAGCACTTT AGATATATGG ATCATACCTT TGGTTTGAAG
CAAACGAAGC AAAAGATATG CAAGCAGTGC GGTATGAAAT CGAATCGTGA AGAGAAACTA
CTAAATATTG ATTGCCAAAT TCGAGGGAAA TCTGACATTC ACGAAGCGTT GGCTGCGATG
ACCGATACGG AGCTAATGGA AGGGAGTAAC AAAGTTTTTT GCGACAACTG CAAAGTAAAC
ACCGATACTG TTTTAAGGAC AGCGATCTCA ACGCTTCCCA ATATGCTTAT TTTATCACTG
AAGCGGTTCG ATCTGGACTA CAACACTTTC GAGACTGTGA AACTAAACAG TCGATGCGCC
TTTGGACAAA CTCTTAATAT GAAACCGTAC ATGTTGGAAG GACTAGAGGA AGCCGAGCAA
GGCGCACAGG GACCTTCACC CATGGAAACG GAAGACGCCA ATAATTCAGT TGACGTCAAC
ATTTCCCCCG CTGGCAAAGA TGAGGACTAC GAGTATAAAC TCGCTGGAGT ACTTGTGCAC
GCCGGAGTTG CTCAAGGTGG TCACTACTAC AGCTTTATCA AGGACCGCAA CCCTGGCTCC
GAAGAAAAGT GGTATCGCTT TGATGACGAA GATGTAACTC CTTTCGATCC AGCAGCTATT
GAGACGGAAT GCTTCGGGGG CAAAGTAAAG AAAGAGACGA AGTGGCCGAA TGGGCAACTG
CATACTATTG AACAAGAGCA GTTCGCGAAC GCTCTCATGC TTTTTTACGA GAAAGTGAAA
TCTTCAGACT TGCCCCCACC ATCTGATAAC CCGATGCGAC AGCGGGACAT CAATACTTCA
GTTTGCTCCA CTGGCTTCGA TGCGTTCGAG CCCGATGTTC GTAGAGCCAA TGCAACTCAT
CGATGGCAAT CTTTTCTTTT TGACGCCGAA TTTCATGCCT TTTTAAAGGG AATTTTGGGA
ATTTGCCGAA TTGGCAATCC TCCAGGCAAT GGCGGGAGGG ATGATTGGCA AAAACAATGC
GTGCCTGCGT TACTTTCTTT TGTGTTTGAC GTTCTTCTCT ATTCGTCCGA CCGGAGTGCG
CTGAACGATT GGACTCAAAT GCTGGAAGAG ATACTTTTGA GCAACCAAGA AGTCTCCAAG
TCCTTTGTTC ATCATCTCGC TCAAAAATGT GACAATGTTA GCGACAATTG GGTTCGAACG
TTTCTGCTTG AGTGCCCCGA CCAGAGCTCA CGCCAGGCTG CAGTGCGAAT CTTTAGCGCT
GCTTTTCAAT CATGTGCACG ACTTGAATCT GAGCTTAAAG CGCTGGCAGA TTGGACCGCT
GCTTGGAAAC AACAAATGGA ACAACTATCG GTGCAGCAAC GAGAGGCTAA TCGGCTTGTG
GCTCTTCCCT GTGTACTAGA GAGAGAGTGG AAAGGCTTTG AGGATACAAA CAAATTGGAT
GGCTCCGCTT CAAGCATGGG GAAAATAATA TCTTTTCTGA ATGTTTTGTT GGAGGCTTTG
CCGAGGAGCT TTCGTTTCAA TGCAGAGGTC TTTACGTTTG TGCGCAACTT GGCTACAATG
CTTTTGGAAG GTGATGAGAA TCCGTTTACT CTCGCTTTGA TCGAAGCGTT GATTCCTGCG
AGACTCGTCA CTCTAGCCGT GCGGGATCGG GTAGCAAGTC CACTCTGCCT GGCTTTTCCA
GGTCTTTCGG TACCAGTGGA AGTTGCCCGC AGCCAGCTTC GGGCGGAGTC GAACGCGTCC
TCGCACATGA TGTCGATGAA TACCAATCAT TCTTTGAACG GGCCAGACAT GAACAGTATT
AGAGGCCCGA CGCATTCGGA TTTGATGGCA CTTTTTGAAG CACTAGTGTG CATTTTGGGT
TTACCAGGGG CAGTTCACGT TCCAATTGTG CGTGATTTGG AAGATTTAGG AAGAGGCAGA
CACAAATTTG CACTCAATGA GACCACCGTG AAAGCGCTCA CCGCAGTCTT TCAGGAATGT
TGTTCACCGG GCGCTCCAGG CATGGGCCAG CGTGAAATCG AAATCTATCT AAGCAGATGC
GATGTCGACG CGGCAAACGT GTCAAAACAA AAGATAAACG ATATCATGTC CAAGTACCCC
ATTGCTAAAT GCGACCACGA TCTTCCTGGC AGCAATTTTT TAAGCCTCGA AGGTTTCCTT
GCTTATTACG AGGACACTGT TCAAACGAAT GACGTACGCG TTCGGGCCGA CTTGCACACA
TTTGGATTTC GGCCTGATCT TACGAGACGA TCGAGGCTTT CCCGGCTTGT CCCTGTACGG
AATCAAGAGA AGGATAGAAA ACCGCCAGAG AGTGTTGCGA TTGATGTAGC AGAGACGTTC
AGAGATGGAT TTGCTGATCT AGGCCGCTAC GGAAACCTGG GTTTGAGTAG TAGTCCAGCT
CTATTTGTGC TCGCCGACAG TGTTAGCGAA GCACTTTCCC AGTACCTCAT CGCTGCAGCT
ACTTACCGTC GCGACACCAA TAGCCTCACG CTGGCGACGC TTCAGGAAAT CCATAGAACG
CCAAATGATT GGAACGGATC GGAATCCATC GGCGCTTCGC TGAATATTTT GATGGTTATT
GCAGCTACAC CGGATGATGA TCAAGATGAG AGAATATCCA GAATCATGTC CAGCCAAGGT
AAAGCTGCCC GCAACGTAGA ATATGGAGCG GGTATTTTGC AGGTTCTTCG AGCTTTCTTT
CGTACACGTC AAGCGCAGCA GTTCAGCAAC GAAATGCGAT GGGGCTATGA GCGGTACGTC
GGTTTATTGA AGGAACTCCG TCGTGTTTAT CCCGTCTTTG TTTGGATGAA CAACCATCGA
GACCAGTGGA GTTTTGTAGA ACGTGAAGTG TTGGATTCAG CTTCTCGACT CCAAGGAAAA
TTTCGAACCG AGTACGTCCA CCGTGTACCC GACCACGCAA TTCAATCTGA TCACAATTCA
CACGCTGATT CCGATATGGC AAACATAAAC GATTCGGACG ATGACTCTCA GCTTTCGCCG
GCCGATCATT ACAACGGGCG CGAAATTAGC ATCCCCAATT CCGAAGCCAA CGATGGTCCA
TATCAGATTG TCGTGGAAGG CGCAGGAAAT TCTTCCGTAA ATGGTGTGTA CCACCAGTGC
GGCTATTTCG AAGGTGGGTG CCGCTACGCC ATGTCGGGAA ATTGGCGCAA CGAACGGTAT
CGCTTCTTCA TCTTTCAGTG CAACGTTAGC AATAATACCA AGCATTGGTA CATCTCCATA
GTTCCCTACG ACAGCCAGCC CGGTACATCA GCAGACATTG ACTTTTACAC TGCCCCGGCG
ACATCTGATT TCTTGCGCGT GCCGCCCCAC ACTGGTTGGG TCAAGTCACA AGAAGGCACC
GACCCATTAC CACGCTTGAC TTACAAACGG TTATCTTCTG AAGGCGGTAC GCCTGAGCGT
GTGTTGAATG GATCTGTTTT GGAAGAGAGC GACAAAAGTG ATTCTCCGTA CATCTGAAAA
AAGCAGAAAC GCTCACCAAA CTCTGGCTAA AAATTTAATA TTAATACGTC ATGTAGAGCC
GTATGATTTT ATCC
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| Protein sequence | MNSVLQQLFM MPELRDSMCS APLPRSLRSS GGSTVLVGND LVGKKISLQW DTGISYDAFV
EGFNDVTGMH IIRYCPIQIA TVGGSTIHQI QPEDIDSLPP VLPEEFILTE GRSGMETGVY
DVVSDVSENL DGNEMSSKAI NTIQETEDEK TSRHLLEEFQ RTFIHLQEGS KGRCFDPRTL
VEACACLKLE FDVWQQNDAS EFATKLLDRL EIALRRWAPE HFRYMDHTFG LKQTKQKICK
QCGMKSNREE KLLNIDCQIR GKSDIHEALA AMTDTELMEG SNKVFCDNCK VNTDTVLRTA
ISTLPNMLIL SLKRFDLDYN TFETVKLNSR CAFGQTLNMK PYMLEGLEEA EQGAQGPSPM
ETEDANNSVD VNISPAGKDE DYEYKLAGVL VHAGVAQGGH YYSFIKDRNP GSEEKWYRFD
DEDVTPFDPA AIETECFGGK VKKETKWPNG QLHTIEQEQF ANALMLFYEK VKSSDLPPPS
DNPMRQRDIN TSVCSTGFDA FEPDVRRANA THRWQSFLFD AEFHAFLKGI LGICRIGNPP
GNGGRDDWQK QCVPALLSFV FDVLLYSSDR SALNDWTQML EEILLSNQEV SKSFVHHLAQ
KCDNVSDNWV RTFLLECPDQ SSRQAAVRIF SAAFQSCARL ESELKALADW TAAWKQQMEQ
LSVQQREANR LVALPCVLER EWKGFEDTNK LDGSASSMGK IISFLNVLLE ALPRSFRFNA
EVFTFVRNLA TMLLEGDENP FTLALIEALI PARLVTLAVR DRVASPLCLA FPGLSVPVEV
ARSQLRAESN ASSHMMSMNT NHSLNGPDMN SIRGPTHSDL MALFEALVCI LGLPGAVHVP
IVRDLEDLGR GRHKFALNET TVKALTAVFQ ECCSPGAPGM GQREIEIYLS RCDVDAANVS
KQKINDIMSK YPIAKCDHDL PGSNFLSLEG FLAYYEDTVQ TNDVRVRADL HTFGFRPDLT
RRSRLSRLVP VRNQEKDRKP PESVAIDVAE TFRDGFADLG RYGNLGLSSS PALFVLADSV
SEALSQYLIA AATYRRDTNS LTLATLQEIH RTPNDWNGSE SIGASLNILM VIAATPDDDQ
DERISRIMSS QGKAARNVEY GAGILQVLRA FFRTRQAQQF SNEMRWGYER YVGLLKELRR
VYPVFVWMNN HRDQWSFVER EVLDSASRLQ GKFRTEYVHR VPDHAIQSDH NSHADSDMAN
INDSDDDSQL SPADHYNGRE ISIPNSEAND GPYQIVVEGA GNSSVNGVYH QCGYFEGGCR
YAMSGNWRNE RYRFFIFQCN VSNNTKHWYI SIVPYDSQPG TSADIDFYTA PATSDFLRVP
PHTGWVKSQE GTDPLPRLTY KRLSSEGGTP ERVLNGSVLE ESDKSDSPYI
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