Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46074 |
Symbol | |
ID | 7201424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 157383 |
End bp | 158606 |
Gene Length | 1224 bp |
Protein Length | 380 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180583 |
Protein GI | 219119656 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTCGTGTG TGCATCACCC TTCTCCAGAA TTTTGACCAT GCCTCGCTGG CACGTTATTG GTAGAGTGAT GGCGGTCGCC GTCGGCTTTG AGGCAACGTC AAGTGGTGCG TTTTCGGTCG CACCCCGGAG GCGTTCGTCC CCACGATCCT TCCCGTTGGC GGTACGGCCG TCGTCGACCA CCGCGGCATC CTTGCCGCAG ACGACGCCGT TGCCGAAACA CACGTTTGCC GGTATGGTGG AACACGGAAT CCGCGAGCGC TTCGGAGACC ATGCCGATCG CGTGATTGAG TCCTGGAGAC TTCTAGACCA GGACTACGAA CACCAAGAAT TCGTCGGCTC CGGCGATCCA GAAACGAGCA ATTGCCACCA GTGGGCGCAT TCCTACGTCC CGGGCTTGTC CATCCAAGAG TTTTGGGATA CTGCGGAGTT TGGCTGGTGC CAAAGGCTCG AATCCAAGTA CAAGGCAATC CGCAAGGAGT TTCTCGCCGT CACGGCGGAC ATGGAACGGC TGACTAGGGA AGGCAACAAC GTTTGGGCCG GTGCCTTGAC GGAGGACGCA TCAAGCTACG GGGAAGGTTG GAAAACGTTG GTGCTGATGA ACCGGGGAAG ATGGGATCCA GTCAACGTTA ACCTCTTTCC CGTCACGTCG CAAGCAATTC ATGATTGTCA TGTTCCGGCC GCCGAAGTCT TTTTCGCCAG CATGAAGCCC AACTCGGCCA TCCAAAGGCA TTCCGATTTT ACCAACTTTG TTTTGACCAG CCATTTGGCT TTGGACATAC CGTACTCGGG CCAGAATAAA TGTCGCTTAA CGATTGGGGA TACAACCCGC GAGTGGATCA ACGGACAAGT ATCCATGTTC GACACGTCGC TCATGCACGA CGCGGTGAAC GAGGCCGATC AAACGCGATA CATTCTCATG ATGCGCGTAT GGCATCCCGA CCTGACCGAG GCCGAACGGA ACGCTCTACA GTTCACCTTT GATTGCTTGG AAACACCCGA GCTAGTGAGC GAGGATCCCG GCCAGCGATT CCTGGCGGAG CGGGAAGTGC AAGCCTCCCG ATCCTTTCCC CAAATAAAGC GCGACGTTAG CCGCGTTGTA GGCTTTGGCG GCAAGGCGAA AGGAGGAGCA AAAAAGAATA AGGCAAAAGC TAGCACTGGA GGAGGTCGTG GATTCAGTTG ATATTATAGT TTTACCGATA GTCCTATAAT CGATTCAGAA TCTA
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Protein sequence | MPRWHVIGRV MAVAVGFEAT SSGAFSVAPR RRSSPRSFPL AVRPSSTTAA SLPQTTPLPK HTFAGMVEHG IRERFGDHAD RVIESWRLLD QDYEHQEFVG SGDPETSNCH QWAHSYVPGL SIQEFWDTAE FGWCQRLESK YKAIRKEFLA VTADMERLTR EGNNVWAGAL TEDASSYGEG WKTLVLMNRG RWDPVNVNLF PVTSQAIHDC HVPAAEVFFA SMKPNSAIQR HSDFTNFVLT SHLALDIPYS GQNKCRLTIG DTTREWINGQ VSMFDTSLMH DAVNEADQTR YILMMRVWHP DLTEAERNAL QFTFDCLETP ELVSEDPGQR FLAEREVQAS RSFPQIKRDV SRVVGFGGKA KGGAKKNKAK ASTGGGRGFS
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