Gene PHATRDRAFT_46074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46074 
Symbol 
ID7201424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp157383 
End bp158606 
Gene Length1224 bp 
Protein Length380 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180583 
Protein GI219119656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTCGTGTG TGCATCACCC TTCTCCAGAA TTTTGACCAT GCCTCGCTGG CACGTTATTG 
GTAGAGTGAT GGCGGTCGCC GTCGGCTTTG AGGCAACGTC AAGTGGTGCG TTTTCGGTCG
CACCCCGGAG GCGTTCGTCC CCACGATCCT TCCCGTTGGC GGTACGGCCG TCGTCGACCA
CCGCGGCATC CTTGCCGCAG ACGACGCCGT TGCCGAAACA CACGTTTGCC GGTATGGTGG
AACACGGAAT CCGCGAGCGC TTCGGAGACC ATGCCGATCG CGTGATTGAG TCCTGGAGAC
TTCTAGACCA GGACTACGAA CACCAAGAAT TCGTCGGCTC CGGCGATCCA GAAACGAGCA
ATTGCCACCA GTGGGCGCAT TCCTACGTCC CGGGCTTGTC CATCCAAGAG TTTTGGGATA
CTGCGGAGTT TGGCTGGTGC CAAAGGCTCG AATCCAAGTA CAAGGCAATC CGCAAGGAGT
TTCTCGCCGT CACGGCGGAC ATGGAACGGC TGACTAGGGA AGGCAACAAC GTTTGGGCCG
GTGCCTTGAC GGAGGACGCA TCAAGCTACG GGGAAGGTTG GAAAACGTTG GTGCTGATGA
ACCGGGGAAG ATGGGATCCA GTCAACGTTA ACCTCTTTCC CGTCACGTCG CAAGCAATTC
ATGATTGTCA TGTTCCGGCC GCCGAAGTCT TTTTCGCCAG CATGAAGCCC AACTCGGCCA
TCCAAAGGCA TTCCGATTTT ACCAACTTTG TTTTGACCAG CCATTTGGCT TTGGACATAC
CGTACTCGGG CCAGAATAAA TGTCGCTTAA CGATTGGGGA TACAACCCGC GAGTGGATCA
ACGGACAAGT ATCCATGTTC GACACGTCGC TCATGCACGA CGCGGTGAAC GAGGCCGATC
AAACGCGATA CATTCTCATG ATGCGCGTAT GGCATCCCGA CCTGACCGAG GCCGAACGGA
ACGCTCTACA GTTCACCTTT GATTGCTTGG AAACACCCGA GCTAGTGAGC GAGGATCCCG
GCCAGCGATT CCTGGCGGAG CGGGAAGTGC AAGCCTCCCG ATCCTTTCCC CAAATAAAGC
GCGACGTTAG CCGCGTTGTA GGCTTTGGCG GCAAGGCGAA AGGAGGAGCA AAAAAGAATA
AGGCAAAAGC TAGCACTGGA GGAGGTCGTG GATTCAGTTG ATATTATAGT TTTACCGATA
GTCCTATAAT CGATTCAGAA TCTA
 
Protein sequence
MPRWHVIGRV MAVAVGFEAT SSGAFSVAPR RRSSPRSFPL AVRPSSTTAA SLPQTTPLPK 
HTFAGMVEHG IRERFGDHAD RVIESWRLLD QDYEHQEFVG SGDPETSNCH QWAHSYVPGL
SIQEFWDTAE FGWCQRLESK YKAIRKEFLA VTADMERLTR EGNNVWAGAL TEDASSYGEG
WKTLVLMNRG RWDPVNVNLF PVTSQAIHDC HVPAAEVFFA SMKPNSAIQR HSDFTNFVLT
SHLALDIPYS GQNKCRLTIG DTTREWINGQ VSMFDTSLMH DAVNEADQTR YILMMRVWHP
DLTEAERNAL QFTFDCLETP ELVSEDPGQR FLAEREVQAS RSFPQIKRDV SRVVGFGGKA
KGGAKKNKAK ASTGGGRGFS