| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46052 |
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| Symbol | |
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| ID | 7201303 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | - |
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| Start bp | 97599 |
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| End bp | 99253 |
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| Gene Length | 1655 bp |
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| Protein Length | 315 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180570 |
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| Protein GI | 219119629 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.283581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACTG CCACCTTGGC CGTTGTGGTC GGAGCCGCCG TACACAGCCT TTTCAATACC
GTCAAGTGCG CCGGGATTGG CACCAATCCT GTACAGTGGA GACAACAATG GGCCGTTGAG
GTGGTCAAAA TTGCCAATGG CATCGTGCAT CCCAAAGATT ACGCCCGCAT CCAACCCAAG
GAGCGTCGCG GCAATGACGA CAACAGCAAC CCCACAATAT TGACCCGCCC GTTTCTCTGT
CCACCTTCTG GGTGGAGGTC ACCACCACCC CTGCCTTCCC AACCGGATTT CATTTGCAAC
TACAACTCCA CAATGATAAC GTATCCTCAA GAAGCACAGG CGTCGACCCA ACACCGCCAC
ATGCCAAACA ACCCCTCCTG CAGCGGTTGG GTGCCATGGC AAGCATGACT ACAGATGGTG
CGGACAACAC AATGAATTGT GCGGACTGGT GGAAAAAGCG TGCAGAACAC GTTGACGGCA
TTGGTGTACG CGTTTGATAC CGCTTCGCAG AAACAGCAAG AGGCGGACCG GATCACGTCA
AGTCTCTTTC TGCTTTGCTT GCCTGGCTTG CAACTGGTCA GCGGCGTCGG CACGATTTGT
CTGGATCAAC TCGAGGCACG TCAGTATGAT TTTGAACATA CGGCTTCCGG GATGGATGAT
GCGGAAGAAG ATTTCGTCCA TCAGCCGTCG AACGATAGCT TGTTGCCGGC CTTGACGTAC
GTGGCGGGAG ACCATCCTCT CATGACATCC TTACTAGCGG CTCCGGACGA CTGCTTTTGG
ATTCCCGGTC GACCCGTCAC AAGCGGCTGC CGCATATGCT GTGCAATTTA GATTACGTTA
TTGAGACACT CGGTACTGCG ATTCGACTTC TCTTACCACG ACGCTTTCTG GTATATCACG
GGCCATGTCA ACTGGAATGA CAGTTTTGAA TACCGGTTCG CGCGATGGCG CGCACTACTT
GGGTCGTGGC ACCCAAGGCG AGCCTGTCGA AACTAATCTT GTGTGTTTGG CCACAAATCC
CGACACGGAT GGTTTTGGAC AGGCGCAATC TCAGTTGAGT ATTCAGAAAC ATGATGTGAC
TGTTTCGGGA CTCGATCGTT ACCATGCTAA GAAGCATGGT AACTATGATG AATGTGCCCA
CGGTGCCGTG TATAACACCG TGGAGAATAG TGAAACGGAC CACGATGGCG CTTGGCAGAT
CGTGGGGCCG AATGGAAAGT GAACAGATTA GCTCTTTAGT TTAGAGTTTA TAAATCTTAA
CAACGATTGT GTGAAAACCA TATTCGTTAG TTCGTATCTC TTCGTTAGGA GCCAGACGAG
TCTTGATCAC CTCGTGCTGT CTTCAGAAGC CAGGAGATAC TTGACCGTTG TCAGATTAAC
AGTCTTGATT TGCTAATCAC TTTGCTCCCG TTTGTTGGGT ATTGCCTGGT TCTGTGACAG
AACGGCAATA AGGCAACCCA TTGGGTAAGA CCAGTGGCTT TGTTGTTGTT GTTGTTTCGA
TCTGCTGACG AGTCGATCGG ATAATTGTTG TCTCGCTTGT CCTTGGTGCA CGAGATACTG
TGTTTGTCTC GTTTGTCCTT GGTACACGAG ATACTGTTGT GTGAATGGCC CGACAGTTGC
GTTCGAGAAT CATTCCTGCT TTGACCATGG ATCCT
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| Protein sequence | MHTATLAVVV GAAVHSLFNT VKCAGIGTNP VQWRQQWAVE VVKIANGIVH PKDYARIQPK
ERRGNDDNSN PTILTRPFLC PPSGWRSPPP LPSQPDFICN YNSTMITVQN TLTALVYAFD
TASQKQQEAD RITSSLFLLC LPGLQLVSGV GTICLDQLEA RQYDFEHTAS GMDDAEEDFV
HQPSNDSLLP ALTYVAGDHP LMTSLLAAPD DCFWIPVLNT GSRDGAHYLG RGTQGEPVET
NLVCLATNPD TDGFGQAQSQ LSIQKHDVTV SGLDRYHAKK HGNYDECAHG AVYNTVENSE
TDHDGAWQIV GPNGK
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