Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46052 |
Symbol | |
ID | 7201303 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 97599 |
End bp | 99253 |
Gene Length | 1655 bp |
Protein Length | 315 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180570 |
Protein GI | 219119629 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.283581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACACTG CCACCTTGGC CGTTGTGGTC GGAGCCGCCG TACACAGCCT TTTCAATACC GTCAAGTGCG CCGGGATTGG CACCAATCCT GTACAGTGGA GACAACAATG GGCCGTTGAG GTGGTCAAAA TTGCCAATGG CATCGTGCAT CCCAAAGATT ACGCCCGCAT CCAACCCAAG GAGCGTCGCG GCAATGACGA CAACAGCAAC CCCACAATAT TGACCCGCCC GTTTCTCTGT CCACCTTCTG GGTGGAGGTC ACCACCACCC CTGCCTTCCC AACCGGATTT CATTTGCAAC TACAACTCCA CAATGATAAC GTATCCTCAA GAAGCACAGG CGTCGACCCA ACACCGCCAC ATGCCAAACA ACCCCTCCTG CAGCGGTTGG GTGCCATGGC AAGCATGACT ACAGATGGTG CGGACAACAC AATGAATTGT GCGGACTGGT GGAAAAAGCG TGCAGAACAC GTTGACGGCA TTGGTGTACG CGTTTGATAC CGCTTCGCAG AAACAGCAAG AGGCGGACCG GATCACGTCA AGTCTCTTTC TGCTTTGCTT GCCTGGCTTG CAACTGGTCA GCGGCGTCGG CACGATTTGT CTGGATCAAC TCGAGGCACG TCAGTATGAT TTTGAACATA CGGCTTCCGG GATGGATGAT GCGGAAGAAG ATTTCGTCCA TCAGCCGTCG AACGATAGCT TGTTGCCGGC CTTGACGTAC GTGGCGGGAG ACCATCCTCT CATGACATCC TTACTAGCGG CTCCGGACGA CTGCTTTTGG ATTCCCGGTC GACCCGTCAC AAGCGGCTGC CGCATATGCT GTGCAATTTA GATTACGTTA TTGAGACACT CGGTACTGCG ATTCGACTTC TCTTACCACG ACGCTTTCTG GTATATCACG GGCCATGTCA ACTGGAATGA CAGTTTTGAA TACCGGTTCG CGCGATGGCG CGCACTACTT GGGTCGTGGC ACCCAAGGCG AGCCTGTCGA AACTAATCTT GTGTGTTTGG CCACAAATCC CGACACGGAT GGTTTTGGAC AGGCGCAATC TCAGTTGAGT ATTCAGAAAC ATGATGTGAC TGTTTCGGGA CTCGATCGTT ACCATGCTAA GAAGCATGGT AACTATGATG AATGTGCCCA CGGTGCCGTG TATAACACCG TGGAGAATAG TGAAACGGAC CACGATGGCG CTTGGCAGAT CGTGGGGCCG AATGGAAAGT GAACAGATTA GCTCTTTAGT TTAGAGTTTA TAAATCTTAA CAACGATTGT GTGAAAACCA TATTCGTTAG TTCGTATCTC TTCGTTAGGA GCCAGACGAG TCTTGATCAC CTCGTGCTGT CTTCAGAAGC CAGGAGATAC TTGACCGTTG TCAGATTAAC AGTCTTGATT TGCTAATCAC TTTGCTCCCG TTTGTTGGGT ATTGCCTGGT TCTGTGACAG AACGGCAATA AGGCAACCCA TTGGGTAAGA CCAGTGGCTT TGTTGTTGTT GTTGTTTCGA TCTGCTGACG AGTCGATCGG ATAATTGTTG TCTCGCTTGT CCTTGGTGCA CGAGATACTG TGTTTGTCTC GTTTGTCCTT GGTACACGAG ATACTGTTGT GTGAATGGCC CGACAGTTGC GTTCGAGAAT CATTCCTGCT TTGACCATGG ATCCT
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Protein sequence | MHTATLAVVV GAAVHSLFNT VKCAGIGTNP VQWRQQWAVE VVKIANGIVH PKDYARIQPK ERRGNDDNSN PTILTRPFLC PPSGWRSPPP LPSQPDFICN YNSTMITVQN TLTALVYAFD TASQKQQEAD RITSSLFLLC LPGLQLVSGV GTICLDQLEA RQYDFEHTAS GMDDAEEDFV HQPSNDSLLP ALTYVAGDHP LMTSLLAAPD DCFWIPVLNT GSRDGAHYLG RGTQGEPVET NLVCLATNPD TDGFGQAQSQ LSIQKHDVTV SGLDRYHAKK HGNYDECAHG AVYNTVENSE TDHDGAWQIV GPNGK
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