Gene PHATRDRAFT_46020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46020 
SymbolH2A-m2 
ID7201515 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp4684 
End bp5655 
Gene Length972 bp 
Protein Length138 aa 
Translation table 
GC content52% 
IMG OID 
Producthistone H2A isoform 2 
Protein accessionXP_002180358 
Protein GI219119185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCA ACATGCGTGA TGAAGCAACT GCACATCGAT AAGCTTTTCG GACGTACCAT 
TTTGCATAAC ACGAAGAGAG GATTGTTGGT TTTCACACCA AGAAATTTGT GCTGGCCGTG
AGCTCGGAAG CCCACGGCAC ATCGACCGAC GGACCTGGGC TGCCGCCGCC GACTGACAGA
GCAGATGGTT GTGGGACGAT CGATGTGCGT GAGCGAGCCA ACGTTTCGCG CCACTCTGAT
TGCACCGATG GATGGGCAGG CCACTCCATG CAACAAAAGT CGCTTGTTCT TTTTTCCGCG
CCAGAGAAAC TCTGTCTGTC GGCCGAACGT AAGGTTCGTT CTCAGTAGCG CGCTGACACC
CGGAGTTTAG TGAAATCCTA TGGCAGCACA TCCCGTCTCA CAACACCTCT CTAGAGTGAA
CGGATTGCTT TCGGGTACAG TTTTTTACGG TCCAACATTC AACAATAAAC ATGTCTGGAA
AAGCAGGTAC GTTTGGTCTG TGCTGCAAAG CTTGCGTACG GTGAGATTTC CTATCTTTTA
TCTCACATGT GAAATGGCTT TATTGGAATA GCTGGTGGTA AAGGAAAGGG CAAGGGAGGT
CGCGGCGACA AGAAACAGAC GACTTCGTCT TCGTCCAAGG CGGGCCTTCA ATTTCCTGTC
GGTCGTATCG GTCGTTACTT ACGTCAAGGA AAGTACGCAA CCCGAATGGG AGCCGGGGCA
CCCGTGTACC TTGCTGCCGT TCTCGAGTAT CTGTGTGCGG AGATTCTGGA GCTGGCAGGT
AACGCCGCAC GCGATAATAA AAAGAGCCGC ATCGTACCGC GTCACATCAC GCTTGCCGTC
AAGAACGACG AGGAACTGAA CAAACTTTTG GGAAACGTCA CCATTGCCGC CGGAGGTGTG
TTGCCCAACA TTCACGCTAT CCTGTTGCCA AAGAAGACAA TCAAGACCAA GGGTCCCAGT
CAGGACTACT AA
 
Protein sequence
MSRNMPGGKG KGKGGRGDKK QTTSSSSKAG LQFPVGRIGR YLRQGKYATR MGAGAPVYLA 
AVLEYLCAEI LELAGNAARD NKKSRIVPRH ITLAVKNDEE LNKLLGNVTI AAGGVLPNIH
AILLPKKTIK TKGPSQDY