Gene PHATRDRAFT_36259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36259 
Symbol 
ID7201509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp943155 
End bp944204 
Gene Length1050 bp 
Protein Length349 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180544 
Protein GI219119574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAT CCGTGTCTCG TATCCTTCGT GGAGGGGCAG TACGCCGAAT AGCAATAGGC 
CAAAGAGGGA ATGCCGACGC CGGTACTCAG CTGACAGCAC TGAGCCCAAC GCTGCTTAGT
GTATTGGCAG GCAGTGCCGC TGGTGCGATT GGGGTCGGGG TTGCCTTCCC ACTCGACACG
TTGAAAACCA AAGCGCAGAC CATGCGCTCT CTCGGAAATG ATGTTGGTAC TATTGCAACT
ACTACGACTG CTACTGGTAC GGGTGAAGGG ACGTGGTCTC CTCAATCCGA AAAACTCAAC
ATGATCCAGC TTATTGGCGT CATATGGAAT CGTGAGGGTC TCGATGGTTT CTTTTCGGGA
GTGAAGGGCA TGATGATAGG TCAAGCCATC ATTAAGGCAT TGGCGTTTTC GGCAAACGCG
AATGCGCTTT CTTGTCTAAA AGCATCCGAC TGGTCGCAAG ACCTTTCGAC GGGTAGCATT
TTGCTAGTTG CTGCGTGCTT TGCAGGTTTC GTCTCCAGTT TTGTCGTGGC TCCTATTGAA
CGTATTAAAG TTATGATGCA ATCATCGTCA CCCGGCAAGT ATATGAACGA GCTGTACTGC
CTTCAGGTAG TGCTCCACAA TGAAGGTATT GCGGGGCTAT TGACCCGTGG GCTTGGGGCG
ACTTTGGCCC GAGAAATACC ATCTTATGGA ATTTATTTTT GGCTGTACGG GTTTCTATCC
CAGAGCCCTA TCGCTTCCTT ACTACCCGCC ACGGTGGCGC CACTGATCTT TGGGGCAATC
GCGGGAATGT CGTCCTGGCT GCCTGTTTAT CCTATTGACG TTGTTAAGAC CACTCTGCAA
AACACAGAAG GTGGTATGCA ACCCAACTTG ACCGGCGAAG GCGCCAATCC GACAGCTTGG
CAAGTTGTGT GTGAGTTGTA CCGAGATGGA GGAATAGGGA TCTTTTTCGA TGGTCTCGAC
GCTAAAATGC TAAGGGCAGC TGTCAACCAC GCTGTCACAT TTTCCATTTA CGACTGGCTG
ATGAACACAG TGTTCGTGGC GAACATATAA
 
Protein sequence
MNLSVSRILR GGAVRRIAIG QRGNADAGTQ LTALSPTLLS VLAGSAAGAI GVGVAFPLDT 
LKTKAQTMRS LGNDVGTIAT TTTATGTGEG TWSPQSEKLN MIQLIGVIWN REGLDGFFSG
VKGMMIGQAI IKALAFSANA NALSCLKASD WSQDLSTGSI LLVAACFAGF VSSFVVAPIE
RIKVMMQSSS PGKYMNELYC LQVVLHNEGI AGLLTRGLGA TLAREIPSYG IYFWLYGFLS
QSPIASLLPA TVAPLIFGAI AGMSSWLPVY PIDVVKTTLQ NTEGGMQPNL TGEGANPTAW
QVVCELYRDG GIGIFFDGLD AKMLRAAVNH AVTFSIYDWL MNTVFVANI