Gene PHATRDRAFT_36257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36257 
Symbol 
ID7201390 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp934961 
End bp937774 
Gene Length2814 bp 
Protein Length835 aa 
Translation table 
GC content46% 
IMG OID 
Productphosphoketolase 
Protein accessionXP_002180542 
Protein GI219119570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAA AGACTTCCTA CAACGAGACC AAGACGCGAA GAAAAACTGT TCCATCAGCC 
TTTCTGATGG TGGATAGATA TTGGATGGCA TCCAACTACC TTGTTGTTGG ACAGGTATGC
TTTGGTCCAT GAAAACCTTA TAAGTTCTCA TTCGCTCCTT CATCGGAATA TCTCTCACTA
GACTTATTTG TGAACCCTCA GATCTATTTA ATGGACAAAA ATCCACTATT GAAGCAGCCG
CTCAAACCTG ACCATGTGAA GTCGAGACTA CTCGGACACT TTGGTACCTG CCCAGGTCAG
GTAAGATTTA TGAGAGGAGC GTTTACGGTT AGTTTTTGAA TCTGACGCCG CCATTCATTT
CTTGTAGAAC TTTATCTACG TCCACTTAAA CCGTATCATT TGTGAACGAA AACTCAGCAT
GTTTTACGTT TGTGGGCCCG GTCACGGCGG CCCTGCGATG TTTGCTCAAA CTTACCTTGA
GGGCTCGTTT ACAGAGCGCT ACCCTGACAT ATCGAAGGAC GAAGAAGGTA TCGGAAAATT
GTTCAAGCAA TTTAGTTTCC CCGGCGGATT TCCGTCACAC GCGGCACCCG AGACACCTGG
ATCCATTCAT GAAGGAGGCG AACTGGGCTA CAGTTTGTCG CATGCCTTCG GCGCGGTGTT
TGATAAGCCT GATTTGATTG TGGCTTGCGT CGTCGGGGAT GGCGAAGCCG AGACTGGCCC
TTTGGCTACG TCTTGGCACT CCAACAAATT TTTAAGTAAG TCAAACCTGG TAACGTGCAG
GAACAGTCCT AAGTTTTCTA GCTAACGCTC TGCTTTACAT GACATGTGTG CCTAGATCCT
GCAAAAGATG GAGCCGTTTT ACCAATCCTT CATCTCAATG GTTTTAAGAT TGCGAATCCG
GTCGTTTTAG CTCGCATACC AGAGGAAGAG TTGCTTTCTC TTTTTCGAGG CTATGGGTAC
AACCCAGTCA TTGTCGAGGG TTCTGATCCG GCGGAGATGC ATCCAAAATT CGCGGCAGAG
CTAGACTATG CCGTGGACAC TATTCTATCG ATACAGAAGG AAGCACGAAC TCATTTAGAA
GAGGGGCTCC AGCTTCGACG ACCGACATGG CCAGTAATTC TTCTAAAAAC TCCGAAAGGC
TGGACAGGAC CAAGTGAAGT TGATGGCGTC AAGATCGAAG GGTCTTACAA ATCCCACCAA
GTCCCTGTCT CAAATCCCTC AGAAAATTTA GAGCACTTAG ATATTTTGGA AAAATGGTTA
AGGAGTTATC AGCCAGAAAA TGCATTCGAC GACAATGGGA AATTGCTCCC CGAGCTACAA
GCACTGGTTC CTCCACGACA TCTCCGAATG GGATCCAACC CCTATACGAA CCCAGTTATT
TCCCCCCTTC TCTTACCCAG TTACGAAGCG TATGGGGTAA AGATTGACAA AAATTCACGC
GGGAAAGCGA AAGCCTCCGA TACTTTTACC TTAGGAACAT ATTTGCGCGA TGTGATCATC
AAGAATGTTA AGCACAAGAA CTTTCGAATT TTTTCGCGTA AGTTTGGTAC ATTGTCTCAA
TGAAAGACAG GAGTGACATG TTTCTAATCT CTTCCGAGTT TTTTAATAGC CGATGAAACT
GCGTCAAATC GCCTTCATGC AGTGTATGAA GCCACCAACA AGCAATGGAT GGGCTCGCTG
AATAGCGACG ATGATACTCT TGCTGACCAC GGACGTGTGA TAGAAATGCT CTCCGAACAT
CAATGCGAAG GATGGTTGGA AGGATATCTA CTCACTGGAG GTCATGGCCT CTTGAATTCA
TATGAAGCTT TTATCCACAT AGTAAGCTCC ATGTTTAACC AGCATGCGAA GTGGCTGAAA
ATCTGCAAAG AAACTCCGTG GAGAAACGAG CTCTCAAGCC TTAATATTCT CCTTTCGTCG
CACGTTTGGC GTCAGGATCA CAATGGTAAG GCAATTCCTA CTGTTCGGTG TTGGATCGAT
TCGGATGCTC TTATCCAGTC TTATCTCCTT CAATTTTTCG TAGGATTTAC ACACCAAGAT
CCGGGATTCT TGCAGCATGT GGCTAGTAAG AAACCCGGGA TAATTCGTAT TTATCTGCCA
CCGGATGGGA ACTGTCTTCT ATCGGTCATG GACCATTGTC TCTCCTCGAG ACACTACGTC
AACATCGTGG TAGCCGGCAA ACATCCCTCC CATCAATGGC TTACGCCTGC AGAAGCGAGT
GAGCACTGCA CAGAGGGAAT TGGTATTTGG AAGTGGGCAT CAAATGATAT AGGTCGTGAA
CCTGACATAA TTGTTGCTTG TGCGGGTGAC GTTCCGACGC TAGAAGCTCT TGCCGCGGTG
TCTATTGTTC GTAAAAAAAT GCCAGAGTTC CGTATTCGAT TTATCAATGT CGTCGATCTC
ATGAAATTAA CCAACACGAG TCATCACCCG CATGGATTGA GCAATGAAAA GTTTGATTCG
CTTTTTACAA CTGACAAACC AGTTTTGTTC GATTTTCATG CTTATCCAGA GCTGGTAGAA
CAGCTAATAT TTTGTAGATC GAACAGAAAT TTCACTGTTC GAGGATACAA GGAAGAAGGA
ACGATGAGTA CACCGTTCGA TGGATGTGTG ATGAACGGAG TTGATCGCTT CCATCTGGTA
ATTGATATAT GCAATATAAT TGAGCACCAT TGCAGGACGG TGACCGAAAA AACCCGTTGG
CTTGCACCTT ACGTCAGTCA AGACATGAGA CAGCTCCTTG CCAAACACAA AAAGTATATC
CATGGCAACG GTGTTGATTT GGAAGAGGTG GCTGACTGGG AGTGGGAATG CTAA
 
Protein sequence
MNEKTSYNET KTRRKTVPSA FLMVDRYWMA SNYLVVGQIY LMDKNPLLKQ PLKPDHVKSR 
LLGHFGTCPG QNFIYVHLNR IICERKLSMF YVCGPGHGGP AMFAQTYLEG SFTERYPDIS
KDEEGIGKLF KQFSFPGGFP SHAAPETPGS IHEGGELGYS LSHAFGAVFD KPDLIVACVV
GDGEAETGPL ATSWHSNKFL NPAKDGAVLP ILHLNGFKIA NPVVLARIPE EELLSLFRGY
GYNPVIVEGS DPAEMHPKFA AELDYAVDTI LSIQKEARTH LEEGLQLRRP TWPVILLKTP
KGWTGPSEVD GVKIEGSYKS HQVPVSNPSE NLEHLDILEK WLRSYQPENA FDDNGKLLPE
LQALVPPRHL RMGSNPYTNP VISPLLLPSY EAYGVKIDKN SRGKAKASDT FTLGTYLRDV
IIKNVKHKNF RIFSPDETAS NRLHAVYEAT NKQWMGSLNS DDDTLADHGR VIEMLSEHQC
EGWLEGYLLT GGHGLLNSYE AFIHIVSSMF NQHAKWLKIC KETPWRNELS SLNILLSSHV
WRQDHNGKAI PTVRCWIDSD ALIQSYLLQF FVGFTHQDPG FLQHVASKKP GIIRIYLPPD
GNCLLSVMDH CLSSRHYVNI VVAGKHPSHQ WLTPAEASEH CTEGIGIWKW ASNDIGREPD
IIVACAGDVP TLEALAAVSI VRKKMPEFRI RFINVVDLMK LTNTSHHPHG LSNEKFDSLF
TTDKPVLFDF HAYPELVEQL IFCRSNRNFT VRGYKEEGTM STPFDGCVMN GVDRFHLVID
ICNIIEHHCR TVTEKTRWLA PYVSQDMRQL LAKHKKYIHG NGVDLEEVAD WEWEC