| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36198 |
|---|
| Symbol | |
|---|
| ID | 7201473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | - |
|---|
| Start bp | 772565 |
|---|
| End bp | 773222 |
|---|
| Gene Length | 658 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180707 |
|---|
| Protein GI | 219119912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.206579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCAG TTGGCCCCCT CCCTCGTCGG ATCGTTAAGG TAATTGCGAG AAAAGGCTTC
TGAAAGGGGC ATTTAAAAAA GAGCGAGAAA TGGCATTTCT GGATCGCGCG GTTGCTCTGA
TTGCGTTCCG AGCGAGGTGC TTTTCCATCG CAACGTTTTC GTTTTAAACT TCCTATTCTT
ACAAATAGTT CTCTCTTGTT TGAAGGAAAC TCAACGTCTG ATTGCGGAGC CGGTCGCAGG
AATTAGCGCG ACTCCTTATC AAGATAACTT GCGTTATTTC GCTGTAGCTA TCGAAGGGCC
TACCGATTCC CCGTACGAGC GCGGCGTGTT TCAGCTAGAG CTTTTCTTAC CTTCGGACTA
CCCAATGGCA CCTCCAAAAG TGCGGTTTCT GACTAAAATA TATCACCCAA ACGTCGACAA
GTTGGGAAGA ATTTGCCTGG ATATTCTAAA GGATAAGTGG AGTCCGGCTT TGCAAATTCG
AACAGTTTTG TTGTCAATTC AGGCACTGCT GTCGGCACCC AATCCGGATG ACCCGCTTGA
CAACAATGTA GCAGAAGTTT GGAAAAGTAA CGAACCAGAA GCTCTTAGAC GGGCTCGAGA
GTTCACGGAA AGCTTCGCAA TGAAGCCGAA CGCTGCTGAG ACAGCAAAGG GTCCATAG
|
|---|
| Protein sequence | MASVGPLPRR IVKETQRLIA EPVAGISATP YQDNLRYFAV AIEGPTDSPY ERGVFQLELF
LPSDYPMAPP KVRFLTKIYH PNVDKLGRIC LDILKDKWSP ALQIRTVLLS IQALLSAPNP
DDPLDNNVAE VWKSNEPEAL RRAREFTESF AMKPNAAETA KGP
|
|---|
| |