| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36196 |
|---|
| Symbol | |
|---|
| ID | 7201213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | + |
|---|
| Start bp | 769339 |
|---|
| End bp | 770160 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180506 |
|---|
| Protein GI | 219119493 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0147559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTCTG ATCTAGGTTT GACACGAAAG CCTAGCACAT CGTGGAGGCG ACCGTTCGGC
ACTCCATGCA TGGCAAATGC CGCCAAAGTG GTAGGTATTG GTCTCGTTTC GATTTGGCTT
TTTTCGTTCA TACAGTCGTC GGTTGTCACA TTTATGCCAA GGCAGGCAGG AAGCTGTACC
ATATCGTTTG GGGATTACAA AGGATCGGAA TACATCACCG ACAGTACGGT CGGACTTCCA
AAATGCCTCG TGCAGAGTCG ATTCCTCAAA GTACAGCAGC ACCGGGTCCG AATGCCGCCA
GATTCCGACA ACATTATTGA TGACTGGCTA TGGATCGACT ACCACGATCG GATCAACGTA
CTCGTCGAAG CCCCCGTCGA ACAAGATAAT TCCCAGGAAA GGCACTTTTA CGTGTTTGAG
CAATCCAAAT ACGCCTTGGA AAACCGCAAT TCAATCGCAA TCGTAGGGGG CATTATCGAA
CCTGGCGAAC AAGCCGAACA GGCTGCACAA CGAGAAGTCG CCGAAGAAAT GCACGTTTCG
TGTCTGACAT TTAAATTATT GGGACGCTTT CGGACGGACG TCAATCGTGG TATGGGCTGG
ACAAATAGCT TCCTCGCTTT GGACTGTAAG AAAATTACGG AACGAAGTTT TTCAAACGAC
GCATTCAATG TGGAGGAAGT TGGCGTTGCG GATACGGAAC GGCAAGATCT GCAAACTGTT
CCACTTTCAA AACTTAGAGA GCTCGCTGCG CAAGGAAAGT TTCTAGAAAT CCAGTGGACA
GCAACCGTTG CTACTGCGTT ATTACAGCCA GAACTACAAT AG
|
|---|
| Protein sequence | MGSDLGLTRK PSTSWRRPFG TPCMANAAKV SSVVTFMPRQ AGSCTISFGD YKGSEYITDS
TVGLPKCLVQ SRFLKVQQHR VRMPPDSDNI IDDWLWIDYH DRINVLVEAP VEQDNSQERH
FYVFEQSKYA LENRNSIAIV GGIIEPGEQA EQAAQREVAE EMHVSCLTFK LLGRFRTDVN
RGMGWTNSFL ALDCKKITER SFSNDAFNVE EVGVADTERQ DLQTVPLSKL RELAAQGKFL
EIQWTATVAT ALLQPELQ
|
|---|
| |