Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_36162 |
Symbol | |
ID | 7201300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 698552 |
End bp | 699352 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180692 |
Protein GI | 219119882 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.820786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACGA GACCAAGTAT TGAGATAAAT AACAAGGCCG TATCCTGCAT TCAGAATGGC CAGTCGAAGG AAGCGCTTGA GCTGCTGAGA ATAGTGCTCG CTGACTTGAA AGATCAATTC GCTGCGAGCG ACAACAATTT ATTTCCCGTT TCATCCTCGC GATGCACTGT ACCTGTCATC GACGACTTTT CCTCCACCCC GTGCGTTCGG CCTTACACTC ATGTCGATAG CACCTTCGAG TTATCAAGAA CGGCTTCATA TAATAGCTAC GAACACGGAC CCGATGCAAT GATGGAAGCC GTACAGGCAA GGTCTTCAAT TCGACCTGTT CCCGTTCTTG ATGATATTCT TCTACAACAG AGCATTGCTA AGGAAGAATG CGCTCTTTGT ATCTATGATC AAGCTTTACT CGTTTCTTTA GAAGAGCAAG ACGGAGAGGT CATCACATCC GTTATTCTTT ACAACATGGC GTTTGTTAAT CACAACCGTG GAATTCATCG AGGCCGAACT TCCTTTCTTT GTAAGGCTCT CCGACTGTAC AAAATGAGCC TCGACATCCT TTTGAAGAGT GACTGTCGCT CTCATTCTAT CGATATTCTG CTTTTGGCTT TGTTCAATAA CGCTGCCCAG ATTTATTCCC AGCTTTTCGA TCTGGAAGAA ATGAGGCAAT GCCTTGATTG CATGAGAGAA GTTCTTGCTT CTGATCCCCA AGAGTCCAGC GAGAGCGACC AGCTCGGAGT CTTTTTCCTC AATACGATAT TCTACCCCGG CGAAGAATTC ACCTTAGCCC CAGCTGCCTA A
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Protein sequence | MNTRPSIEIN NKAVSCIQNG QSKEALELLR IVLADLKDQF AASDNNLFPV SSSRCTVPVI DDFSSTPCVR PYTHVDSTFE LSRTASYNSY EHGPDAMMEA VQARSSIRPV PVLDDILLQQ SIAKEECALC IYDQALLVSL EEQDGEVITS VILYNMAFVN HNRGIHRGRT SFLCKALRLY KMSLDILLKS DCRSHSIDIL LLALFNNAAQ IYSQLFDLEE MRQCLDCMRE VLASDPQESS ESDQLGVFFL NTIFYPGEEF TLAPAA
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