Gene PHATRDRAFT_36162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36162 
Symbol 
ID7201300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp698552 
End bp699352 
Gene Length801 bp 
Protein Length266 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180692 
Protein GI219119882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.820786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGA GACCAAGTAT TGAGATAAAT AACAAGGCCG TATCCTGCAT TCAGAATGGC 
CAGTCGAAGG AAGCGCTTGA GCTGCTGAGA ATAGTGCTCG CTGACTTGAA AGATCAATTC
GCTGCGAGCG ACAACAATTT ATTTCCCGTT TCATCCTCGC GATGCACTGT ACCTGTCATC
GACGACTTTT CCTCCACCCC GTGCGTTCGG CCTTACACTC ATGTCGATAG CACCTTCGAG
TTATCAAGAA CGGCTTCATA TAATAGCTAC GAACACGGAC CCGATGCAAT GATGGAAGCC
GTACAGGCAA GGTCTTCAAT TCGACCTGTT CCCGTTCTTG ATGATATTCT TCTACAACAG
AGCATTGCTA AGGAAGAATG CGCTCTTTGT ATCTATGATC AAGCTTTACT CGTTTCTTTA
GAAGAGCAAG ACGGAGAGGT CATCACATCC GTTATTCTTT ACAACATGGC GTTTGTTAAT
CACAACCGTG GAATTCATCG AGGCCGAACT TCCTTTCTTT GTAAGGCTCT CCGACTGTAC
AAAATGAGCC TCGACATCCT TTTGAAGAGT GACTGTCGCT CTCATTCTAT CGATATTCTG
CTTTTGGCTT TGTTCAATAA CGCTGCCCAG ATTTATTCCC AGCTTTTCGA TCTGGAAGAA
ATGAGGCAAT GCCTTGATTG CATGAGAGAA GTTCTTGCTT CTGATCCCCA AGAGTCCAGC
GAGAGCGACC AGCTCGGAGT CTTTTTCCTC AATACGATAT TCTACCCCGG CGAAGAATTC
ACCTTAGCCC CAGCTGCCTA A
 
Protein sequence
MNTRPSIEIN NKAVSCIQNG QSKEALELLR IVLADLKDQF AASDNNLFPV SSSRCTVPVI 
DDFSSTPCVR PYTHVDSTFE LSRTASYNSY EHGPDAMMEA VQARSSIRPV PVLDDILLQQ
SIAKEECALC IYDQALLVSL EEQDGEVITS VILYNMAFVN HNRGIHRGRT SFLCKALRLY
KMSLDILLKS DCRSHSIDIL LLALFNNAAQ IYSQLFDLEE MRQCLDCMRE VLASDPQESS
ESDQLGVFFL NTIFYPGEEF TLAPAA