Gene PHATRDRAFT_36149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36149 
SymbolAP1sigma 
ID7201294 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand- 
Start bp672325 
End bp673047 
Gene Length723 bp 
Protein Length202 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180685 
Protein GI219119868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGA CAGATATTGC TGGGGAAGCA GTTGAAACGG GCAAAGCCGC TTGTGGGTGG 
GACTTTATCG TGCTCATGAG CCGGCAAGGC AAGATTCGCT TGAGTGAATT CTTTTCATCC 
TATTCAGAAT CGGATAAGCG TCGTATTGTC CGTGACATTC AAGCTGATAT CCTTCCCCGG 
GCTCCAAAGA TGTGCAACAT TATTGAAAAG GGCACTTACA AGTTCGTCTA CCGGCGCTAC 
GCGTCCTTGT ACTTTGTGGT CGGCGTACCA CAAGGTCTCA ACGAACTTAT AGTGTTGGAA 
CAGATCCATT TGTTTGTGGA AGCTCTGGAT GGATATTTTA ATTCCGGTAA GTACATTGTT 
TTTTTTTGTT GAGCTGTGTT TCTTGAATTT ATGCCATCAC AAGTGCTCTC TTTGAAGATG 
GCGGGCGCTA ATCTCTGCCT TTTCAATCCT TTTGCTACAG TTTGCGAACT GGACTTGGTA 
TTTTCCTTGC ATAAGTCACT TTTGATTCTT TTTGAGATGT TTATTGGTGG TATGTTGTGC 
GAGTCAAACA AACGCGAAGT CCTGAAGGCG ATTGTAGAAG CAGAGGAATT GGTCGAAGAA 
ATGACCAAAC CTGGTGAAGA CACGGCTTCA CAACTGGACG ACGGTCTGTC CTTTCAGGAA 
CAATTTCAGC TCGGCCGTAC TCCAGGCCGA CGTCAGGGAA ACAGTGGACC GGGACGGCGA 
TAA
 
Protein sequence
MTTTDIAGEA VETGKAACGW DFIVLMSRQG KIRLSEFFSS YSESDKRRIV RDIQADILPR 
APKMCNIIEK GTYKFVYRRY ASLYFVVGVP QGLNELIVLE QIHLFVEALD GYFNSVCELD 
LVFSLHKSLL ILFEMFIGGM LCESNKREVL KAIVEAEELV EEMTKPGEDT ASQLDDGLSF 
QEQFQLGRTP GRRQGNSGPG RR