| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36142 |
|---|
| Symbol | |
|---|
| ID | 7201188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | + |
|---|
| Start bp | 659200 |
|---|
| End bp | 660204 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180481 |
|---|
| Protein GI | 219119441 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTCG TTTTCGCAAC AGCCGGTTAT GATCACATTA TTCGATTCTG GGAAGCACCT
TCTGGTATTT GTTCGCGAAT CATAAAGTAT CCGGACTCGC AGGTCAATCG ATTGGAGATC
ACACCCGACA AGCAATTTAT TGCTGCTGCT GGGAATCCAG TTATTCGCTT GTACGAAATT
CTTGAGCCCT CTGCGATGGG CGGTGACGAA AGGGACCAGC AAGCTGTTTT AACTCTGGAA
GGCCACGGGT CGAATGTTAC ATCCATTGGG TTTCACAAAG ATGGGCGTTA TTTATACTCT
GGTTCCGAAG ACGGAACGAT CAAAGTGTGG GACTTGCGTA GTCCTAGCTA TAGTCGCAGC
TTTGATGTTG GAGCCGGCGT CAATTCCGTA ACTCTAAGGA CGGATCGAGA CCAGTTCGTA
TCTGGCGACC AGAATGGATA TGTGAAGATT TGGGATCTGG GGGGGAATGG TTGCATCAAT
AGTCTCAAGC CGTCATCGAC CAATGCAAAA ACAGACGGGC CGGCATCTCG AAGGCGATCG
GCCGAAGGAA CAGTTCCTAT CCAAGCAGTT GACATTTCGG AGGATTCTCG GACGCTCGTG
GCAGTCTCGA ATCACGGCAG TGTTTTTGTA TGGGACCCAA CTTCAAGCGT TGGAAGTGAA
GATGACAACA GCACGATGCG ACCCGTTAAA AAGTTTCGAG CTCATCCTCC TGGCACTTAC
TGCTTGCACG GGAAAATAGC ACCCGATTGT CGTCATTTGG TGACCACATC CAGTGATGGC
ACGGCGAAGC TGTGGGATAC AGCCACTTGG GAATTAACAC ACACTCTGCA AAACCAAAAA
TGGGTATGGG ATGCAGCCTT TTGCGCAGAC TCTTCGTATT TAGTGACAGC AAGTAGCGAC
CACGTCGCCA GACTGTGGAA TTTGCAAAAG GGATCGGTCG TCCGGCAATA TCACGGCCAC
CAATCATCCG TTACATGCGT CGCTCTCAAC GACAGTAGTG TATGA
|
|---|
| Protein sequence | MSVVFATAGY DHIIRFWEAP SGICSRIIKY PDSQVNRLEI TPDKQFIAAA GNPVIRLYEI
LEPSAMGGDE RDQQAVLTLE GHGSNVTSIG FHKDGRYLYS GSEDGTIKVW DLRSPSYSRS
FDVGAGVNSV TLRTDRDQFV SGDQNGYVKI WDLGGNGCIN SLKPRSAEGT VPIQAVDISE
DSRTLVAVSN HGSVFVWDPT SSVGSEDDNS TMRPVKKFRA HPPGTYCLHG KIAPDCRHLV
TTSSDGTAKL WDTATWELTH TLQNQKWVWD AAFCADSSYL VTASSDHVAR LWNLQKGSVV
RQYHGHQSSV TCVALNDSSV
|
|---|
| |