| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36120 |
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| Symbol | |
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| ID | 7201178 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | - |
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| Start bp | 609471 |
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| End bp | 611553 |
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| Gene Length | 2083 bp |
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| Protein Length | 626 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180672 |
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| Protein GI | 219119841 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00433417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAAC CTCCGTCTGC ACCTACCCAA AGATCAACCA GTACAACGAC TACAACTACA
AATTCTAGTC GCTCTGCTAT TGCCGATTTC AAACGAGGAG TAAAACGAGA CAAGACGCAC
TATCCAGTTC TTAAAGATGA CCGTTATTGG GACAACTTCT ACCGTACTTT TGTCGTTACC
GCAGTATCGC ACAATGTAGT GATAAAGTAT AGCCACGCAA TACTGCAATT TGCCACTAAG
GTGAGCTATT GTCATAGCTA ATGTCAATTG TGAGCGACCG TATATTCCTC GTGAGATGTG
GGATAAACTG TCCGACGATG CAAAGGAGAT TCTCCGTGGT ATGTCTTCTT CTAAGAAGGA
AACGCCTCGG CCAACAGCAA GTCATCATCT GCTTTTCATG CCAACTCCCA CTCTTTAACC
GATACGGGAC ACCCCTCATC AACGGACGAA TTGTTGCACG AAAACGGCAA CGGTAAATTC
CATGAGTGCG GGAACGACAC GGAACTGCTT GCACACCTTA CTGATTGCTC AAGTAATATG
GCAAATGGAG ACATTTGCAA GGTCCTTGCT TCAGCTTCCT CCTATAAGCA AAATTCAAAG
AACTCCCTGC TGTCAAATAT GCTCGAGTAC AGTATTTCCC GACACTCCGT TGCTGGGACT
ACATCCTCCC TCATCAACAG AGGCGCAAAC GGCGGACTTG CAGGAAGCGA TGTTAAAATC
CTTAACAAAA GAGGCCGTTC TGCAAGCATC ACGGGTATTA ATGACCATAC TTTGCCTGAT
TTGGACATTG TCACCGCCGC CGGCCTTGTT GAATCCCAAA ATGGACCCAT CATTGTCATA
CTTCACCAGT ACGCACACCA TGGAAAAGGT AAAACAATTC ATTCTAGTGC GCAACTTGAG
TATTACAAGA ATATTGTTGA GGACCATTCC CGTGTTTTAG GAGGTAAACA ATGTATCATA
ACTCGAGATG ATTATGTTAT TCCTCTACAT GTTTGTCAAG GACTAGCTTA TATGGACATG
CGACCTCCTT CCGATACGGA ATTTGACACG TTACCCCACG TTGTACTTAC TTCCGATGTC
GACTGGGACA CGTCCATTAT TGACAACGAA ATTGACCTTG TCACAGATTG GGATGATGCC
GTCCAGGACC TTCCCAGCGA CGTACGTGGA ACCCTGTTTC AATTCAACTG GTGAAAACCG
ACACAGGCAC GTTGCGAACT TTGACATTTT TTCGTCACCT GACTTTGTTG ATCGGTCCAC
GGCTATCAAT AATATACTCT TGTCAAATCA ACATGACATG ACCCCCAATC CACACAATTA
CGAAGCCTTG CGTCCTTGTC TTGGCTGGAT CTCCGCCGAC ACAGTCCAGA AAACCATTAT
GGCCACTACG CAATTCGCTC GTGAAGTCTA TAATGCACCC ATGCGTAAAC ATTTCAAGTC
TCGTTTTCCG GCACTTAACG TTCACTGGCG CAACGAAGCT GTAGCTACTG ATACCATTTG
GTCGGACACG CCTGCTGTTG ATGATGGCGC TAAATTTGCG CAATTATTTG TCGGTAGACA
ATCGCTTGTC ACCGACATTT ACCCTATGAA AACAGACAAA GAGTTTGTTA ATGCTCTCGA
AGACAATATT CGTCATCGTG GCGCCATGGA TAAACTCATC AGTGATCATG CTAAAGCCGA
GATCAGCAAG AAAGTTTCTG ATATTACCTG CGCTTACCAC ATTGATCAAT GGCAAAGCGA
GCCTAATCAC CAGCACCAAA ATTATGCCAA ACGCCGAATT GCAACTGTCG AAGCAAATGC
GAATAAAATT CTAAACAAAA CTGGTGCACC CAATTCTACA TGGTTATTGT GTGTTTCCTA
CATTTGTTAT TTGTTTAATC ATTTGGCACA TGAGTCTTTG CACAATTGCA CTCCTCTTGA
AATTCTTAAT GGTAGTACTC CTGATATTCG CGTACTCCTT CAATTCCATT TCTGGGAACC
AAACTACTAC CAACTTGAAG ACCCTACTTT TCCTTCCGAT GGAACTGAAA AGAAAGGCCA
TTTTGTTGGA ATTGCAGATT CCGTTGGTGA TGCCCTTACC TAA
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| Protein sequence | MPEPPSAPTQ RSTSTTTTTT NSSRSAIADF KRGVKRDKTH YPVLKDDRYW DNFYRTFVVT
AVSHNVVINK SSSAFHANSH SLTDTGHPSS TDELLHENGN GKFHECGNDT ELLAHLTDCS
SNMANGDICK VLASASSYKQ NSKNSLLSNM LEYSISRHSV AGTTSSLINR GANGGLAGSD
VKILNKRGRS ASITGINDHT LPDLDIVTAA GLVESQNGPI IVILHQYAHH GKGKTIHSSA
QLEYYKNIVE DHSRVLGGKQ CIITRDDYVI PLHVCQGLAY MDMRPPSDTE FDTLPHVVLT
SDVDWDTSII DNEIDLVTDW DDAVQDLPSD VRGTLHVANF DIFSSPDFVD RSTAINNILL
SNQHDMTPNP HNYEALRPCL GWISADTVQK TIMATTQFAR EVYNAPMRKH FKSRFPALNV
HWRNEAVATD TIWSDTPAVD DGAKFAQLFV GRQSLVTDIY PMKTDKEFVN ALEDNIRHRG
AMDKLISDHA KAEISKKVSD ITCAYHIDQW QSEPNHQHQN YAKRRIATVE ANANKILNKT
GAPNSTWLLC VSYICYLFNH LAHESLHNCT PLEILNGSTP DIRVLLQFHF WEPNYYQLED
PTFPSDGTEK KGHFVGIADS VGDALT
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