| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36115 |
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| Symbol | |
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| ID | 7201177 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | + |
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| Start bp | 579145 |
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| End bp | 581528 |
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| Gene Length | 2384 bp |
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| Protein Length | 782 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180465 |
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| Protein GI | 219119408 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000280602 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCTC ATGAGGTAAA AAAGAGTATT GCCTACATCA ATGGCCACAA AGTCCAAATT
GCGCTGGATG CAGCCAAGAG CAGTGCACCA CCTAGTGTTA TTGGAAAAAT GCTCCAGTTA
CAAACTGGCA ACATCTTGTC GGACTCTTCT TTGCAACACA TAAGGATACG GTTGGGAAAA
GAGCAAGAAA CAGTGTTGCT CAAGGATGAA GAATTCATGA CGCAGGCAGA CAAGCTTTTG
TCCTATCTTG AGAACACTCC CGAGATCAGC TTTTGTGCTA TATACGATGA CCCAGATTCA
CCTCTCTTCA CAGTTTACAA GCAGAGAGCA AAAAAAGACC GCAGGTGTCT ACACACAAGT
ATTAGAGTTA ACTCCGGGGT ATCTGCTGAA ACGGGAATTC TTGACAACGC TACACTAGAT
GCAATGGATC CCAATGGAGA ACTTGATGAC TATGTTGACC GCACACGTTG CGCATTCAAG
CTCCTTGGCT CACAAAAAAT GCTGTTAGGA GTTGCCTGGA CAAATAATGA GAGCAGAAAT
GTATTCTCTC GTTTTTCGGA GATAATGGTA GCAGATGTGA CGGAAGGCAC AAACAACGCC
AAGCGACCGC TATTTCTATT CTCTGGGAAG ACGTCAAACC AAAACACTTT CACAACACTG
TGGGCTTTTT TACCACAGCA GGCTTGTTGG GCCTTCCATT GCGTGTGGAC TCGATGCATA
CCGCAACTAC TCCCAAAGCA AGGAATTCAA CAAATGCGCC TGACAATAAC AGATGGAGAT
CCAAAAGAGT ACGGGACCTT TGTAGATGCA ATACCAACTT TCTACCCTCT TTGCGAACAC
AAGCTTTGTC ACTGGCATCT ACTGTATTGC AGTAATCTCA TGAAGGTGCA GACTGGAAAA
TGTGGAGTTA AAGCTGCTAT TCTATTCCGT GTAGTTGTTC TTTGGATTGA GAGCTGGATG
ACCAAAATTG AGACACAAGA GGAATACAAA CTTTCTAAAA GGCTCTTGGC TGATTGGCTT
GCAACCCCCG AAGCTATTGA TGTCACATTG GGTGGTATGG GGCAAACTAT TGTATCGCAA
ATTAATGCGT ACATGACACT GTCGCTTTTT CCTCACGAAC AGCGCTGGGC TAGATATCGC
TATTTATACA CACGAGCATT CAACACATCT GCAAGCTCGT ATGCCGAGGC AGAAAATAGT
GCTTTAAAAC GACGGGGCGA CGGGGTCAGG CCAAGCTTTT CTGTACCAAA AGCAACTCAG
GTTATAAACA AAGGGACACA AATTAGGTCA AAGAAGAGGC ATCAAAAAGC TGTTTACAAT
TTAAATGCTG CCAAGACAAG AAAGCCTGCC TACTACGCAA ACATTGGGGA TTTAGTGGAT
TACATTCAAG ATTCTCTTTC CAAAGATTTT GAAGCAGCTG CTTCATTTGT GCTCTTCCGT
CCAAATGCAG ACCAGTTTTG GGTCAAGCAA GCCACTCGCA AAAGCAAAAA CACGGACATT
CCGAAAATCA ACGACAGTAG CTATTACAAG TACATGATTC CGCAGTTTGA ACGCACACAA
ATTGTGGAGC TTGTTAATAT TGATGGTACA TTCTATTTGG TGTGTAGCTG CGGAAATTTC
AGCGACAAGC TTCCCCATGT GCCCATCTTT ACAAGGTTCT TGGTCAATCA CCCACGTCAA
CCGATGTCTC TGTACGCTGG ACAAAGCACT GGGATGTGTA TTTGCACCGA AGTGGCCACA
GTGACCTGTC AAAGCACTTG GAAGACCTGT ACAAACAGGA GCAACCAGGT CCAGTATTTG
TTGATAGTGG TCAGTGGGTG ATCGGAAAAG GTGAAAAAGG GTCATATTTT TTCGAAACTT
CGCTTCCGTA CAAGCCCCCT GTCATACGAG ATTTTAATCG ATGGGCAGTG TCTTCGCAAA
CGACTGGAGC TGATTTGAGT GGGACCAAAA ATACCACAAA TATGTATTTT TCGAGTGGAA
TGGTGCAAGA ATCAACAAGC CTGTCCAGAG AGCATGCATT CCAGGATTCA TTGCATGAAA
ATTCCACAAA TTCGCAAAAT TCGGATTGTT TTGATGATAC AGAGGCAGTG ACAACGGAAA
GTGTATCTTC TACGAAAAGA ATGTTTGGCT CAAGTGCTTT TGTGCACAAT TTCCATTTCT
ACCAGGAAAT GTCCAAGCTG GCAGGATTTG ATATGGAAGC TGCTGAGTCG ATGAATAAAG
CTATGCAAGA AGCATTGGAA AAGGTACAAG CCAATGTTGC AAAAAGGGCT GGGAAGATGG
ATTACACTAT AGGACCAGCC ATTACAAAGG ACTGTGTAGG TCTAAGATTG AAGCCAAGCT
ACAGTCCAAA GAAGAGGAGG AAACCAAACT TACAAAGGAA ATGA
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| Protein sequence | MEPHEVKKSI AYINGHKVQI ALDAAKSSAP PSVIGKMLQL QTGNILSDSS LQHIRIRLGK
EQETVLLKDE EFMTQADKLL SYLENTPEIS FCAIYDDPDS PLFTVYKQRA KKDRRCLHTS
IRVNSGVSAE TGILDNATLD AMDPNGELDD YVDRTRCAFK LLGSQKMLLG VAWTNNESRN
VFSRFSEIMV ADVTEGTNNA KRPLFLFSGK TSNQNTFTTL WAFLPQQACW AFHCVWTRCI
PQLLPKQGIQ QMRLTITDGD PKEYGTFVDA IPTFYPLCEH KLCHWHLLYC SNLMKVQTGK
CGVKAAILFR VVVLWIESWM TKIETQEEYK LSKRLLADWL ATPEAIDVTL GGMGQTIVSQ
INAYMTLSLF PHEQRWARYR YLYTRAFNTS ASSYAEAENS ALKRRGDGVR PSFSVPKATQ
VINKGTQIRS KKRHQKAVYN LNAAKTRKPA YYANIGDLVD YIQDSLSKDF EAAASFVLFR
PNADQFWVKQ ATRKSKNTDI PKINDSSYYK YMIPQFERTQ IVELLRKFQR QASPCAHLYK
VLGQSPTSTD VSVRWTKHWD VYLHRSGHSD LSKHLEDLYK QEQPGPVFVD SGQWVIGKGE
KGSYFFETSL PYKPPVIRDF NRWAVSSQTT GADLSGTKNT TNMYFSSGMV QESTSLSREH
AFQDSLHENS TNSQNSDCFD DTEAVTTESV SSTKRMFGSS AFVHNFHFYQ EMSKLAGFDM
EAAESMNKAM QEALEKVQAN VAKRAGKMDY TIGPAITKDC VGLRLKPSYS PKKRRKPNLQ
RK
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