Gene PHATRDRAFT_36060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36060 
Symbol 
ID7201375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp459703 
End bp460671 
Gene Length969 bp 
Protein Length322 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180642 
Protein GI219119779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCGCA TTTCACCGCC ATCAAAAAGT CGCGGGTCGA CCCGGGACGT GCTGATGCTT 
TTGCTAGGCG CTGGTATCGC TTTGGGCTTG GGAGTAGTCT TTTCCGTGGA TTCTGTCGGG
ACCGTTGCAT TGTCAGCAAG TCTACAGCAA CAGCTCGGTA GTAGCACAGC ATCCAACAGC
GATACTCCTG GATGGAATCC GATTCATGTC TTTTACGGAA AGATGAATCA TATTTTAGAT
CCTATACCGG CCGATGAATA CTGGGCAGAC GACGGACCGT ACAACGAACG CAAATGGTTC
AGTCAGCACG GGCAGGATGT GGCGGTGATG AAAATTTTGA ACTTCCAGAA GGATGGATTT
TTTGTCGACT TGGCGTCAAA CGATGCCGTC TGGGCCAGCA ACACCTTTGT CATGGAACAA
AAGTTTGGTT GGAAGGGTAT TTGCATCGAG CCCAATCCAA TGTACTGGTA TCGCCTCTCT
TTTCGCAAGT GTCACGCGGT GGCATCCTTT GTTGGTGCGA AAGATTTCGA CGAGGTACAG
GTGGCCATGA GCGACCGAAA AGAGATAGGA CCGTTTGGGG GCATTGTTGG TGCGGATTTC
GACAATAAGA AAAACAGCAA GACCGAGCCG AGATACACAG CAAGCCTCCA GGGAATTTTG
GAGCGCTTCA ATGCACCCTC AATGATTGAT TTCTTATCTT TGGACGTGGA AGGCGCGGAA
CTTTTTATCA TGAAGAGCTT TCCCTTTCAC AAGTATTCCT TTAAGTGCTT GACAGTAGAG
CGTCCGTCGG AAGAGCTCCA GATGCTACTG ACAAAGAACG GCTACAAGTT TGTGTACCAA
ATTCATAAAA AAGCTGACTC TCTATGGGTG CACAATTCTA TTTTCGATCA GGCCAAGACT
AACTTGGCCG TTCGGCCAGA GGAAATTGGG GAGCGGAATC CAAAAATTAC TAATGCTGTG
GGTTCATAG
 
Protein sequence
MVRISPPSKS RGSTRDVLML LLGAGIALGL GVVFSVDSVG TVALSASLQQ QLGSSTASNS 
DTPGWNPIHV FYGKMNHILD PIPADEYWAD DGPYNERKWF SQHGQDVAVM KILNFQKDGF
FVDLASNDAV WASNTFVMEQ KFGWKGICIE PNPMYWYRLS FRKCHAVASF VGAKDFDEVQ
VAMSDRKEIG PFGGIVGADF DNKKNSKTEP RYTASLQGIL ERFNAPSMID FLSLDVEGAE
LFIMKSFPFH KYSFKCLTVE RPSEELQMLL TKNGYKFVYQ IHKKADSLWV HNSIFDQAKT
NLAVRPEEIG ERNPKITNAV GS