Gene PHATRDRAFT_36021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36021 
Symbol 
ID7201232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp356940 
End bp357638 
Gene Length699 bp 
Protein Length232 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180620 
Protein GI219119733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGAC AAATTGCCGT GAATCTTAAC AACAAGGGTG TCCTCTGCCT GAAAGAGGGT 
AAACTCGTTG AGGCTTTTGA CCTCTTCCGA ACGGCACTGA TGAACGTATC AGGAGATGTA
AATTGCCCCC AAGAAAGTTT CCGATGGTCA CAGACTCAAC CAGCTTCATC TGCTCCAGCT
GCCATTTACT CCGTAACCAA CAATTCGTCA TCTACACCGT TCATGTATTC TTCAGGCATT
AACCTTCTTT CTTCTATCAC AGCTTACTCC CTCGAATCGT CGGTGAATGA CACTGTGTTT
TCTAGCATAG TCATCTTTAA CTTGGCAATT GTCTATCATC TGAAGGGATT TGAATGCAGT
GGGAGTCAAT CTCGAATACA ATTCTTTAAG GCTATGTCAT TATACCAAAA AAGTTACATG
CTCTTGGTCG CTGTGGGTGT GCTCAAAACG GCCACAGGCA ATGCTGTGGT CGACATGGTG
TGCATGTCCG TATTCAACAA CTTGGCTGAA GTTTGTTTTG AGCTGTCCGA TTTCTCAGAA
TGCCAGCGCT ACTTTGTCTG TCTTATGCGT TTTCTCGATT CAGTTGCAAC TTACATTTAC
GACGACGATC ACACCTCCTC AATGCTGTTC CAGGCGAAAA TCAACTTTTT ACTTAATGCT
ACTCTTCTCC AGGAACCCTT TTTGGCGGCC GCTGCTTGA
 
Protein sequence
MSRQIAVNLN NKGVLCLKEG KLVEAFDLFR TALMNVSGDV NCPQESFRWS QTQPASSAPA 
AIYSVTNNSS STPFMYSSGI NLLSSITAYS LESSVNDTVF SSIVIFNLAI VYHLKGFECS
GSQSRIQFFK AMSLYQKSYM LLVAVGVLKT ATGNAVVDMV CMSVFNNLAE VCFELSDFSE
CQRYFVCLMR FLDSVATYIY DDDHTSSMLF QAKINFLLNA TLLQEPFLAA AA