Gene PHATRDRAFT_36007 details

Gene Information

• Locus tag: PHATRDRAFT_36007
• ID: 7201348
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011677
• Strand: +
• Start bp: 322052
• End bp: 325416
• Gene Length: 3365 bp
• Protein Length: 1106 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002180413
• Protein GI: 219119300

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.287397
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCCCG CCACCCGGCA AATGACGAGT GCAGCCGTCT ATGCCCACCT TTTGGACAAC 
GTACTTCTTC TTCCCCAAGG GCATCCTATC CGCCTCAGTT TTGAGCAACA AGGATATGAA 
TCGGCTGATG ATCTTCTGTG TATTTTTGAG AATGAACTTG AGTCTCTTGG ATACACTCCT 
TCTGTCCTTC CCGACGGCCT GGAAAACCCG CCAACTATAC CCCTTCTCAT GGCGCACCGA 
CAGATCATAC GTCATTTCTT GCGCTGGCAG GCATCTTTGG AACGACAAAA GGGGACACCC 
TTGAAGAACT CCGAACTTGT TGCACTTAAC AATGAAGATT TTGTCCTTTA CCGTCGCTCA 
GCCCTTGGTC AAGTCTCGAC AGCAACTGCA CCGGTTAATG CTTCCCCAAC TGTCCAGAGC 
CCCATAGGAA AGACACGTTC GGCTGTCGAG GACTTCAAGC GTGGGATCAA ACGTGACAAA 
ACTCACTATC CCGTGCTTAA AGATGATCGG TACTGGGACA ACTTTTATCG GTCGTTTGTT 
GTTACTGCCG TAACACATAA CGTTGACAAA GTTCTAGATC CGACGTACAT CCCTACCGAT 
CCCTTGGAGA AATCCCTTTT TGAAGAGCAG AACAAGTTCG TATATTCTGC TCTAGAGCAT 
ACTCTCCAGA CGGACATGGG CAAGAACATT GTACGCGAGC ATAGTTTCGA CTTCAATGCC 
CAGGAAGTTT TCCGTAAGGT TGTGAAACAC TACACAGAGT CCGCTAGCGC GAAGATTAGT 
TCGTCTACTA CCCTGGGATA CCTTACAACT GCAAAGTACG GATCGTCATG GACTGGCACA 
GCAGAAGGTT TTATTCTTCA CTGGAAAAAT CACTTGCGCA TCTACAATGA CACTGTTCCT 
GCTGGTGAAC AGCTTCCTCA GCAACTATGC CTTAGTCTTT TGGAGAATGC TGTTCATGAT 
GTACCTGAGC TTCGACAGGT AAAAATCACT GCAACTCTTG ACTTAGCAAA GGGAGGTAAT 
CCTATTAGCT ATGATGGTTA TCTCAGTCTA CTACTCGCAT CGGCATCGCT CTACGACAAC 
GGCAATAATC TATCTAATTC TCGTAGTGGC AAGAACAAGC GCAACATCTA TGCTAATGAA 
CTAGAGTACA ATCCGATGGA TTTTGAGAGT AAACCGGATG TAGACTATGA TATAGATGTG 
TCGCCTACCG CAATCTACGA AGCCAATGCT CATGCCCGTA ACAGCAGTTC CCGGAATCGT 
AGTCCGGCAG CTAATCGCGA GCGACCTTAC ATCCCTCGTG AAATGTGGAA CCTGCTCTCC 
GACGATGCCA AAGCCATCCT CCAAGGCTTA ATAGCCCCCG GGAAGCAGGC CCCGTTGAAT 
AATACGCCAC ACCAATCGTT GCAGGCCAAT ACGCACGATA CCATTGGCGC GGAACGAATC 
ACAACGGACA CCTTCCATGA TTGCGCACCC GAAACTGAAT TGCTTGCCCA CCTGACTGAG 
CGTGTTAGTC ACATGAGCGA CGGCGACATA CGTAAGGTAC TTGCCGCATC TCGTGATGGT 
CCCGCCTATG ATGAGCCCAC ACCACTGCAA TCTAACGTAC TTCAATATCA AGTGTCTCGT 
CACAACGTCA TTGAAACTAC GGCAGCCCTC GTCGACCGTG GAGCCAATGG AGGTCTTGCC 
GGCAGTGATG TCATGGTCTT GCATAAAACA GGTCGTTCTG CAACCATCAC AGGTATCAAT 
GATCATACCT TGTCCGATTT GGACATTGTC ACCGCTGCTG GCTACACTGA ATCCCAAAAT 
GGCCCCATCA TTCTCATTAT GAACCAATAC GCCCATTTGG GACAGGGTAA AACTATCCAC 
TCCAGTGCAC AGCTTGAACA CTATCGCAAC CATGTCGAAG ACCGTTCCCG TACTGTAGGA 
GGTAACCAGC GAATTGTAAC ATTGGATGAC TACATCATCC CATTGCACAT TCGACAAGGA 
CTCGCGTACA TGGATATGCG GCGTCCTACC GACAAGGAAC TTGCGTCCCT TCCACACGTT 
GTCCTAACCT CCGACGTAGA CTGGGATCCC TCCGTACTTG ACCACGAAAT TGATCTCGCG 
ACCTCTTGGT ATGATGACAT ATATGATTTG CCTCAATCAC CTTACGTTGA ACCACGTTTT 
GACCATACAG GCAAATACCT CCATCGTCAC ATTTCCCTTT GCAACCATCG CGATGACGTT 
GTTGACCGCG TATTATATTG CCAACGGCAC CTCGTCACGA AAAATGTGCA AGATTATGAG 
GCCCTTCGTC CGTGTTTTGG ATGGGTCTCT GCTGAAACCG TTCGCAAGAC CATCATGGCG 
ACCACGCAGC ATGCACGCGA AGTATATAAC GCTCCGTTAC GCAAACATTT TAAGTCTCGC 
TTTCCCGCTC TAAATGTACA CCGTCGTAAT GACCCAGTTG CTACCGATAC CATTTGGTCC 
GACACCCCTG CTGTCGATAA TGGTGCTAAA TTTGCACAAC TTTTCGTTGG TCGACGCTCC 
CTTGTCACCG ACGCTTACCC CATGAAAACT GACAAAGAAT TCGTCAATAC CCTTGAGGAC 
CATATCCGTT ACCGGGGTGC CATGGACAAA TTGATTAGCG ATCGTGCCCA GGTTGAAATC 
AGCAAAAAGG TCACCGATAT TACACGCGCA TATAATATCG ACCAGTGGCA AAGTGAACCA 
AACCATCAAC ACCAAAACTT TGCCGAACGT CGTATTGCCA CTATCGAGGC TAATACCAAC 
AACATTCTCA ATCTTTCCGG TGCCCCTGAT TCCGCCTGGT TACTTTGCGT GACATATGTT 
TGTTATGTTT TCAACCATTT GGCACATGAA TCCCTAGATA ACCGCACTCC CCTTGAAGTC 
CTCACCGGCT CCACGCCTGA TATCAGTGTT CTCCTTCAGT TTCATTTTTG GGAACCGGTC 
TATTATAAGC TCGAAAATGC GACATTTCCT TCTGGTGGTA CCGAACAACA AGGACGTTTT 
GTTGGCATAG CCGACTCCGT CGGCGACGCT CTCACTTATA AGATACTTAC CCACACCACC 
AACCGCATTC TTCATCGCTC TAGTGTCCGT TCTGCGACCA TTCCCGGACA AACCAACCTA 
CGCCTTACGC CACAGGATGG GGAGAGTGGT CCTAAACCCA TCAACTTTAT CAAGTCGCGT 
AGAACCGAAA ACAAAAATTC CTATGCCATT AAGGAGTTGC CTGGTTTCAC ACCTGATGAC 
CTTATAGGTC GTACGTTCCT CACCGACACT CGGGATGATG GGGAGCGTTT GAAGGCACGA 
ATCACGCGGA AAATATTGGA CCCAGACAAG CCCTCGGATG TAAAGTTCCT TGTCGAAATC 
AATGA 

 

Protein sequence

MVPATRQMTS AAVYAHLLDN VLLLPQGHPI RLSFEQQGYE SADDLLCIFE NELESLGYTP 
SVLPDGLENP PTIPLLMAHR QIIRHFLRWQ ASLERQKGTP LKNSELVALN NEDFVLYRRS 
ALGQVSTATA PVNASPTVQS PIGKTRSAVE DFKRGIKRDK THYPVLKDDR YWDNFYRSFV 
VTAVTHNVDK VLDPTYIPTD PLEKSLFEEQ NKFVYSALEH TLQTDMGKNI VREHSFDFNA 
QEVFRKVVKH YTESASAKIS SSTTLGYLTT AKYGSSWTGT AEGFILHWKN HLRIYNDTVP 
AGEQLPQQLC LSLLENAVHD VPELRQVKIT ATLDLAKGGN PISYDGYLSL LLASASLYDN 
GNNLSNSRSG KNKRNIYANE LEYNPMDFES KPDVDYDIDV SPTAIYEANA HARNSSSRNR 
SPAANRERPY IPREMWNLLS DDAKAILQGL IAPGKQAPLN NTPHQSLQAN THDTIGAERI 
TTDTFHDCAP ETELLAHLTE RVSHMSDGDI RKVLAASRDG PAYDEPTPLQ SNVLQYQVSR 
HNVIETTAAL VDRGANGGLA GSDVMVLHKT GRSATITGIN DHTLSDLDIV TAAGYTESQN 
GPIILIMNQY AHLGQGKTIH SSAQLEHYRN HVEDRSRTVG GNQRIVTLDD YIIPLHIRQG 
LAYMDMRRPT DKELASLPHV VLTSDVDWDP SVLDHEIDLA TSWYDDIYDL PQSPYVEPRF 
DHTGKYLHRH ISLCNHRDDV VDRVLYCQRH LVTKNVQDYE ALRPCFGWVS AETVRKTIMA 
TTQHAREVYN APLRKHFKSR FPALNVHRRN DPVATDTIWS DTPAVDNGAK FAQLFVGRRS 
LVTDAYPMKT DKEFVNTLED HIRYRGAMDK LISDRAQVEI SKKVTDITRA YNIDQWQSEP 
NHQHQNFAER RIATIEANTN NILNLSGAPD SAWLLCVTYV CYVFNHLAHE SLDNRTPLEV 
LTGSTPDISV LLQFHFWEPV YYKLENATFP SGGTEQQGRF VGIADSVGDA LTYKILTHTT 
NRILHRSSVR SATIPGQTNL RLTPQDGESG PKPINFIKSR RTENKNSYAI KELPGFTPDD 
LIGRTNHAEN IGPRQALGCK VPCRNQ