Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35960 |
Symbol | |
ID | 7201428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 197828 |
End bp | 198748 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | |
GC content | 58% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180390 |
Protein GI | 219119252 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCAG GAAACTCGTT CGTTCGCCAG GCGATTTCGC GGTTTGACGA AACGAAACTG GAAGAATCGC CCAAGTCCTT CACTCCGTTC CCGCGAACCG TCGCACAGGC CTCACCGAGA ACCGTCGCAC AGGCTTCGCC GCGACCCGTC GCACAGCCTT GGCCGAAACC CGTGGCGGAA CCCTGGCCCA AATCCGTGGC GTCGTCGCCT CCGGTAGCGT CTCCCCCGTT GGCGACGCCT CCGTCGTCAT CGTCCTCCAA GAACGTCGTC AAGACGGTTC CCAAGTCCTT CCCCAAGGAC CCCACCGAAA TCACCCGCAA TATGAACGAC GCGCAGGCCC GTACGCTCTT GCGAGATATG GTGCGTGATT TGTTGGGGGA AGTGGACATT CTGCGTCAAC GTTTGGCCGA AACCGAAACC AAGTTGCGCG AATCGCGGGC CGAAGTCAAG CAACTCGATT TGAGTGCCGC CTTTAACGTA CAGACTCTCA ACCAGACTTC CTCAGGAACG AATTCCGCAC CGCGCGTGGC GGATCCCCAC GATGCGGCAC GCACGGAAGC CTTGATTGAA GCCTTGCGCA ACGCCACCAA GACCACCGAT ATACCCGAAC TCTCGGCGCA GGACGTCTCC AGTGAGGAAG CCACCGAACT CGTCATACAC TCGTTGCTGG AAAACGTCCG GAGAACCGCA CAAGACAACG AATCCCTCAC CAAGAAAAAC GATGCACTGC AGGATAAGGT CTGGGATCTC ACGGCGGAAA ACGAAGTACA CGAACTCAAA ATTGCCGCTC TTGAAACACA CTTCAAGACC ATCAACAAGA GTCGCCAAGG TATCGTCACC AGACTCACCA ACAAGTCCAA ACAGGGATTG GCCAACGGAT CACCCACGGC GGCGGGAACA AGTGCCGCCA AACGTTCCTA A
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Protein sequence | MSSGNSFVRQ AISRFDETKL EESPKSFTPF PRTVAQASPR TVAQASPRPV AQPWPKPVAE PWPKSVASSP PVASPPLATP PSSSSSKNVV KTVPKSFPKD PTEITRNMND AQARTLLRDM VRDLLGEVDI LRQRLAETET KLRESRAEVK QLDLSAAFNV QTLNQTSSGT NSAPRVADPH DAARTEALIE ALRNATKTTD IPELSAQDVS SEEATELVIH SLLENVRRTA QDNESLTKKN DALQDKVWDL TAENEVHELK IAALETHFKT INKSRQGIVT RLTNKSKQGL ANGSPTAAGT SAAKRS
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