Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35939 |
Symbol | |
ID | 7201311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 138054 |
End bp | 138863 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180578 |
Protein GI | 219119645 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000575232 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCCTG ATCCTTATGC TGAAAAGATA GTCCTCGACA CCGGAGCGTC CTCTGGGATG GGCAAGGCAA CGGCCATCTA CCTAGCCGGA AAGGGTGTCA AGGCCATCAC GCTCTTTGCC CGCGGCAAAG ATCGTCTCGA CGAAGTCGCC AACGAAATTG AAGCAATGGA TACCGCCACA AAGACTTTGA TTGTCGTCGG CGATGCATCT AAGGTCAGTG ATAACCAGCG CGCTATCGAC GAAACCGTCG CAGCTTTTGG AGGCATCAAC TCTGCTTTTG TCAACGCTGG AGTCTACCGT GGCGAGCTTC CTTTAGCCGA CACTCCGGAT GAAGCAATCG AGGATGTCCT CAATGTAAAC GTCAAGGGAG TTATCTACGC TCTCCGTTGT TTGATCCCTG CCATTTCGAA GACCGTGGGA GACGACAAGG ACATGCCCAC AGGCTCCATT GTGGTAAACT CCAGTTGTAT GGGAGCGAGC GTCATCGCCC CCAAGAGTAA CGGGTCCTCC ATTTACTCCG CTTCCAAGGC CTTTGTCAAT AGTCTTGTTT TGTCAGCTGC TACCGAAAAC GCGCCTCGCA TTCGCGTCAA CGGCGTCATG CCAGGCGTCG TCCAGACTTC CATCATGCCT GTGGATGATG CTACATACCA AATGCTCGGT GCTGCTGTTC AGCCTTTGTA TGGGCGTCCG GGAAAGTCAG TCGAGGTTGC CTCGCTTGTA TCTTACTTGA TCAGCAATGA GGCTTCCTTT ATTTCCGGTA CTAACATTAA GGCTGATGGA CTCTGGTCCC TTTCGGGGGA TAACATGTAG
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Protein sequence | MTPDPYAEKI VLDTGASSGM GKATAIYLAG KGVKAITLFA RGKDRLDEVA NEIEAMDTAT KTLIVVGDAS KVSDNQRAID ETVAAFGGIN SAFVNAGVYR GELPLADTPD EAIEDVLNVN VKGVIYALRC LIPAISKTVG DDKDMPTGSI VVNSSCMGAS VIAPKSNGSS IYSASKAFVN SLVLSAATEN APRIRVNGVM PGVVQTSIMP VDDATYQMLG AAVQPLYGRP GKSVEVASLV SYLISNEASF ISGTNIKADG LWSLSGDNM
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