Gene PHATRDRAFT_35895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35895 
Symbol 
ID7201518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp22424 
End bp23278 
Gene Length855 bp 
Protein Length284 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180554 
Protein GI219119595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0260809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATC CTTCAGCAGG TTGCAGAGCG TTGGTGGTCG CGACTCGCCT GCACCTTGGG 
AAAGCCTCAG CGCCACCATT GCAGAAAGAT TTGGACGCCA AAGTGGCTTC CTTTATTAGA
TTTTGCTCCC ATTCTTGCCA AGCTGCTGTA GGCGTGGTAG CCGTCGATGC CACAGAAAGA
ATTGCTGGCT TTGACTTGGT AAAAGCGGTT CAGAGATCGT GCGACAAAGC CCTTGAAGAT
ACAAGCGTAT CGACGGAGAT TATCCTGTTG CCGGTATCTC CCTGGGGAAA GTTCGTTCCG
GCCTTGAATG CGTTGGTCAC ATTCGCGACT ACTCACGCCT GCAAAGCAAA GCAGGTGCTA
TTTGTGTCCG CGGAAACGAT GGCATCGCCA GAATCGATAG ATGTTCTACT GTCACATATT
ACTGCAGCCG ATGACGTTTT GGTCGCCGGC GCTCTTCTGC CTGGTCATCT ATACGAGGCA
TCAGTGGATG GAAATGAAGC TTTGGAAGTG GAACTGAACG GACGAACGGC ACCTTGGAAT
ACAATGGCCG TGTGGAATTT GAAAAAGCTT GCACTCACTG GATTTCAGTT AGTTTCTGAA
GGACATTTAA CCGACGATCA GACGCAACCT TCTTATGGCG TTGAAGAAGT AGTTGCAATT
GCCATGCTGC AAGCCCTTTT GGGTAAGGAA ATGGCTGTGG CAAAACTCGT GCGATTGCCT
GGTGTCGATT GGGATCAATC TTTTTGCGAC CCCGAGCGGC AAAAATGGCA CGTGGCCAAG
ATGGAATCCA AACGCATCCG ATCGCAAGTA CAGTTGGATT TGTTGGGTTT AAAAGGATCT
GTAATTCATT GCTAG
 
Protein sequence
MFDPSAGCRA LVVATRLHLG KASAPPLQKD LDAKVASFIR FCSHSCQAAV GVVAVDATER 
IAGFDLVKAV QRSCDKALED TSVSTEIILL PVSPWGKFVP ALNALVTFAT THACKAKQVL
FVSAETMASP ESIDVLLSHI TAADDVLVAG ALLPGHLYEA SVDGNEALEV ELNGRTAPWN
TMAVWNLKKL ALTGFQLVSE GHLTDDQTQP SYGVEEVVAI AMLQALLGKE MAVAKLVRLP
GVDWDQSFCD PERQKWHVAK MESKRIRSQV QLDLLGLKGS VIHC