Gene PHATRDRAFT_27762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27762 
Symbol 
ID7201462 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp735113 
End bp735959 
Gene Length847 bp 
Protein Length160 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180700 
Protein GI219119898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.613975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCCG GTATCGCCAA GGGCCGTTTG AGTGAGGAGC GCAAGGCTTG GCGCAAGGAT 
CACCCGATTG GTTTTTATGC CCGGCCAACC TCCAAAGGTG ACGGTAGTTC CGACATGTTT
ACGTGGGAAG CGGGTATTCC CGGCAAAAGT GGTACCGATT GGGAAGGGGG TCTGTTCAAA
GTCCGGATGG AATTCTCGGA AGAGTATCCG TCACGACCGC CCAAATGTAA GTATGCTGTA
GGCGAAGACA AAGTTCAAGT CGATTTGCTG GATCACCAGG AGATGTATCG GATGTCTCTG
CAGCAAGGCA AGTCCTCACA GATTTGCGTT CATTTCGGAA TTGTAGGCAA GTTTTTTCCT
CCGCTGTTTC ATCCCAACGT CTATCCATCG GGGACAATAT GCTTATCAAT TTTGAACGAG
GAAGAAGGTT GGCGCCCCGC AATTACAATT AAGCAGGTAT TGACGGGTAT TCAGGACTTG
CTGGATGATC CCAATCCAGA TTCGCCGGCA CAATCGGAAG CAATCAATCT TTTCCTGAGC
AACAAAGCGG AGTATAAACG ACGTGTCAAG ATTGAAGCTC GTAAGAATCA ACCCCAAAAC
TAACTGTAAA CAATCGATGT GTGTGGGGAG AAAATAGCGG AAAGAAACGG TAACTATCTT
TTGTTGATGA CGAAGGTCAA GGAAGTATGT GGCGAGACAA TGTCAAGCTT TTACGCTTGG
CCTAGCAGCG GACGGTGCAC TTGAGTGCGC ATCGTCCACG GAACGCCGCT GTCCTGGGTC
CTTGACATTG GACTTTTGCC TAACGACCTC ATTGAGACTT TAAAATAGAT TTGCGTCGTT
TTAAGGT
 
Protein sequence
MSAGIAKGRL SEERKAWRKD HPIGFYARPT SKGDGSSDMF TWEAGIPGKS GTDWEGGLFK 
VRMEFSEEYP SRPPKCKFFP PLFHPNVYPS GTICLSILNE EEGWRPAITI KQVLTGIQDL
LDDPNPDSPA QSEAINLFLS NKAEYKRRVK IEARKNQPQN