Gene PHATRDRAFT_27696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27696 
Symbol 
ID7201176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp567640 
End bp568534 
Gene Length895 bp 
Protein Length211 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180462 
Protein GI219119401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.042891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCCAGATTGC CTTCTGTCTT GCTCCTTTCT TACCTCACCT TCTTAGTCGC CGCCACAGCG 
TTCAGCTTTT CCACTTGCCG CGCCGATCGC ACTAGAAACG ACCAAGCTAG GCACGTCATC
GACACCATGT CCATCACCGC ATCCAAAGCG GCGTCTCGAT TGTTCGTTGG CAAGCTACAG
CCAGAAAGCA CGGCGCTTCT GCTTTGTGAT ATGCAGGAAC GGTTCCGTCC CTTGATACAC
AACATGGAAA CCGTAGTCAA CACCTGTCGC TACATGACTT CCGTCGGAAA AGCTCTCAAC
GTACCGGTTC TCGCGACACA GCAGTATACC AAAGTCTTTG GTGAGACCGT TCCCGACTGT
TTCGCCGACC CGCAAGACCT GCAAACAATA CCTAACTTCG ACAAAAAGAA ATTTAGCATG
TTGACGGAAG ACGTCGACAG GGTCTTGGAC GAGTGGAAAA AAGACACGTA CATTATTATG
GGTATTGAAG CACACGTATG CGTCCAGCAG ACTTGTCTAG ATTTATTGGA ACGTGGAGCG
AACGTGCATG TGATTGCCGA CGCCGTCAGT TCGCAGCAGG CCTACGATCG GGAAATTGCT
CTGCAACGCC TCCAAGCGGC GGGATGCTTT TTGACGACGG CCCAATCGGC CGCCTTTATG
CTCCTGCAGT CGGCGGATCA TTCAAATTTC AAGGCCGTCA GCAAACTGAC GGTGGAGCAT
ATGAAGCTGC CGAACGAATT CAATCTTGCG CTTACGAAGT AGCGCTAAAG CTTGCGCACT
ACCTATGCAC TTACACAATC AACGAATAGC TCTAGCTACT TACAAAGCAT CATTTTCTTA
AGTGTTTCCC TTCTTTTGCA TGGCTTGAAT AACTAATGAA AATTCATCTA GCCGA
 
Protein sequence
MSITASKAAS RLFVGKLQPE STALLLCDMQ ERFRPLIHNM ETVVNTCRYM TSVGKALNVP 
VLATQQYTKV FGETVPDCFA DPQDLQTIPN FDKKKFSMLT EDVDRVLDEW KKDTYIIMGI
EAHVCVQQTC LDLLERGANV HVIADAVSSQ QAYDREIALQ RLQAAGCFLT TAQSAAFMLL
QSADHSNFKA VSKLTVEHMK LPNEFNLALT K