Gene PHATRDRAFT_27639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27639 
Symbol 
ID7201364 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp406173 
End bp407465 
Gene Length1293 bp 
Protein Length373 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180631 
Protein GI219119756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0108427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGACGCGTCA TGCCTGAAGA CTTTTTCGTA ATGCGTGTCT TGGGTCGTGG TGGATTTGGA 
CTCGTGACAG GTATGCGTCA AGATGGCTAG TTTTTGTAAA TGCATTCAGG AGGAAACTCA
CTCTCATTTC TTCTTCCCTT TTCAGCCTGT AAGAAAGGAA CGTCCGGAAA ATTATACGCC
ATGAAAGTGA TGAACAAAAG ACGGATAAAG ATGAAGAAGT CGGAACAACT TGCCTTAAAT
GAACGGTACG CATTGGCGGC GGTCGAGAGC AACTTTGTCG TCAATCTGAA ATATTCGTTC
CAATCGAAAG ATGAGGTGTA CCTGATTCTT GATCTCATGA CCGGCGGAGA TCTGGGTTTT
CTTTTGCACC AGAGAGGGCG GTTTCCGAAA AGGGAATGTC AATACTATAC TGCGCGTATA
ATGCTTGGAT TACAAGCTTT GCACGACAAA ACGTATGTAT ATCGCGATCT TAAACCGGAG
AACTGCTTGT TAGCAGACGA TGGTCGCGTC AAAATTACTG ACCTCGGTCT AGCCATCAAA
GTCACACCCG ACCTTCACGG AGCAGCAGGA ACCCGAGGGT ACTGGGCCCC TGAAATGCTA
CGGCGCGACA AGAAAGGGAA GAGGAAACCT TATGGTCACT CTGTAGATTG GTTTAGTTTT
GGGTGCTGTG TTGCCGAGTT TATTTCAGGA TCGAATCCAT TTCGATCCGA GGCAGCGCTG
AACTTTGGGC TGGACAGCGG CAAGCAAACG AAAGAAAAAG CTATTGATTA TGCTACACTG
GAGATGGATC CGCAATTTCC AGATGATAAG TTCGAGCCGG AAGCCGCAGA CTTATGTAGC
AGGCTACTTG ATAAGAATGA AAAAACAAGA TTAGGTTCTT CCGGATGTGA AGAGATAATG
GCACATCCAT GGTTCAAGAA TATGAATTGG GAAGCAATTA TATCCGATCG AAAACGACCG
CCGTTCGTTC CCGCCAAAGA TGTGAACGCA GCAAGTCAGT CGGAAATTGG GAACTTTGTC
GAGGACAAAG CCTACCAAGC GATGGTCATA ACGGAAGAAG ACGAAAACGT CTACAAGTAC
TGGGACTGGA CTAACCCACA TGCCTTTGCT GCGGAAGTGA TTGAATTTCT CATCTACGAG
CGAAAAACAG GGGAACCGTT GGTCCCAACC AATCACAGTG CAACCTGTTG TTGTACACTT
TTGTAGTTGT GTCGATCATC TCTTTTTGAA TGGCACCGTG AACAAATTCG AGTAATAAGA
AATATTAGAA CAGCTCTAGC GATGTTTCGG TTC
 
Protein sequence
MPEDFFVMRV LGRGGFGLVT ACKKGTSGKL YAMKVMNKRR IKMKKSEQLA LNERYALAAV 
ESNFVVNLKY SFQSKDEVYL ILDLMTGGDL GFLLHQRGRF PKRECQYYTA RIMLGLQALH
DKTYVYRDLK PENCLLADDG RVKITDLGLA IKVTPDLHGA AGTRGYWAPE MLRRDKKGKR
KPYGHSVDWF SFGCCVAEFI SGSNPFRSEA ALNFGLDSGK QTKEKAIDYA TLEMDPQFPD
DKFEPEAADL CSRLLDKNEK TRLGSSGCEE IMAHPWFKNM NWEAIISDRK RPPFVPAKDV
NAASQSEIGN FVEDKAYQAM VITEEDENVY KYWDWTNPHA FAAEVIEFLI YERKTGEPLV
PTNHSATCCC TLL