Gene PHATRDRAFT_20588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_20588 
Symbol 
ID7201282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand+ 
Start bp626676 
End bp627440 
Gene Length765 bp 
Protein Length87 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180472 
Protein GI219119422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.961827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAGCATGGC GCCCAAGTTT CAGAAAGGAC CGGATCTCAA GAGATTTATG GTAAGCTCGC 
ACAGCCGCGA ACGTGTAATG CCCGAGCGCG GAAAAGAGGA GAAAAGGCTG ATGCAGAAAG 
GAAACCGCGC CGTCGAATTG CGCGGACAAA GATGAATATA CTTCGTGCGG ATTCGCAAGC 
GCAGAAGCGG AACGCACAAT CGTCGCGAAA CAATCTTTCA AGTGCAAACG CAAGTTCAGA 
CTTTCTATTG AAATTTTTAT AGGCTCGATT TCTGTTGGAG CGTTCGGATG ACACGTGCGG 
CTCCTACCTG TATTGAGCTG ACTTCTAAAC TAGAGAGAAA ACTAACATGT CCATACTCCA 
ACACCCAACA GGACAAACGC CTTAGATTAT CTTTGAATGC CAACCGCAAA GTTATCGGTA 
CTCTACGCGG ATACGATGCC TTCTTGAATG TAGTTCTTGA AGACGTTGAG TCGGAAACCG 
GCCAATACCT GGGGCAAGTC GTCATTCGGG GGAATTCTAT CGTACAGCTG GAAGGATTAG 
AGCGCGTATA AAGTCATAAA ATACTGCCCG ATGAAAGGCA ACGTATAACG AGCTCTACAA 
TGTTTACACG GCGTTTTGAA TTGATTGTAC GAGAAAGACT TCAAAAATAA AATGCACACT 
CTGATAGCTT TTCATCGGGC CTAGCAAGGA CGTAGCAACA GATCTAATTC CTATTGCAGG 
GAGCAAGTAG ATAAGGTAAC CTTTTAGCGA AAATACAGCA CGAAC
 
Protein sequence
MTRAAPTCIE LTSKLERKLT CPYSNTQQDK RLRLSLNANR KVIGTLRGYD AFLNVVLEDV 
ESETGQYLGQ VVIRGNSIVQ LEGLERV