| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_20574 |
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| Symbol | |
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| ID | 7201274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | + |
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| Start bp | 571859 |
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| End bp | 574141 |
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| Gene Length | 2283 bp |
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| Protein Length | 720 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180464 |
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| Protein GI | 219119406 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000077682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GACTATTCCA ATCTCCCACT GAAGCCTGAC CATATGTCGC GGCCCTGCTG GACTTGTCCA
GACGGCAATA TTTATCTCGA GGCCTTTCAC GATTTATACG TCAGTGCGTA CGATTTTCTC
GTCGCCATTG CCGAACCAGT GGCGCGCCCC GAATTTTTGC ACCAATACAA GTTAACACCG
TACAGCTTGT ACGCCGCTGT CGCTACCAAC ATTGAAACCA ACGCAATTGT GTCCGTTCTT
GAACGCCTGT CGAAAAACAA GCTCCCATCC CAGGTCATCA AGTTTATTCG GGAGTGTACA
CAGAAGTACG GCAAGGCCAA ATTGGTCCTT AAGCACAATC GTTTTTATGT CGAATCGGAG
TTTCCGGCCG TTTTACGCGA ACTGCTACGC GATCCTACGA TCGCGCAAGC ACGCATTGTG
GAAGATGTGG TGGATGCATC TGCCTTGGAT GCGGACGGAT TTGTCACGCA ATCAAAGGCA
CAGGAAATGA AAGAGAATCT CCATATGTTG AGGGAACCAG ACGACGATAG TGAAGAAGAC
GAAGAAGGAC TGTCAACCGG GGCAGGCGGC CAACCTACCA AACCCAGCAA TGTCGTCGTC
AGTTTTCAAA TTAAACCCGA ATCTGTTGAA GTTGTGAAAC GCCAAGCCAT TGAACTAGAT
TATCCATTAA TGGAAGAGTA CGATTTCCGC AACGACACTA TGAATCCGAA CGTACCCCGC
ATGGATTTAA AGCCTCACAC GCGTATTCGT CGCTACCAGG AAAGGTCCCT GGCTAAAATG
TTCGGCAATG GGCGAGCTCG ATCCGGAATC ATCGTTTTGC CGTGTGGTGC CGGGAAGACC
TTGACGGGCG TAACAGCGGC GCAAACGATT AAAAAGTCAG TCGTGTGTCT TTGTACCAAC
GCGGTGTCAG TGCTGCAGTG GAAATACCAA TTTCAATTGT GGACTTCCAT TCCGGACGAA
CATATTGCTG TCTTTACTTC TGATCACAAA GACAAACTTG TTGACCCATG CGTACTCGTA
ACGACATATA CGATGATCAG CTACTCCGGT AAGCGTTCAG CGCAATCGCA AGAAATTATG
GACCAAATCA CGTCGCGTGA ATGGGGTTTG TTGCTAATGG ACGAAGTCCA CGTCGTACCG
GCCAAAATGT TTCGTCGCGT TGTGGGATCT GTCAAAGCGC ATTGTCGATT GGGACTCACA
GCCACATTGG TCCGCGAAGA CGACTTGATT TCCGATCTCA ACTTTCTGAT TGGTCCGAAA
CTATATGAGG CAAATTGGAT GGATCTGACT GCTCAAGGAT ATCTGGCGAA CGTTCAGTGT
GTGGAAGTGT GGTGTCCCAT GACAGGCCCG TTTATGAAAG AGTACCTGAT GGCTTCAAAC
TCACGTTTGA AGCAATTGCT ATACGTGATG AATCCGAGCA AGTTACGGGC AGTCGACTTT
TTAGTCCGAT TTCACGAAGC TCGAGGCGAC AAGATTATCG TCTTTTCCGA TTTGGTGTAC
AGTCTGAAGT TGTACGCAGA AATGCTAAAA AAGCCGTTGA TATATGGCGA AACGCCGGAG
CGTGAGCGAC AGGCTATTCT AGGGACCTTC CGAGCGTCCG ATGCAGTCCG GACTATTTGT
ATATCCAAAG TTGGTGATAC TAGTATTGAT CTACCTGAGG CCAATGTGAT TATCCAAGTG
TCGTCTCACT TTGGTTCTAG GCGACAAGAA GCTCAGCGTC TCGGACGCAT TTTGCGTCCC
AAGTCGTATA CACAACAGGA CGGCAGCAAT AGGTCCACCT TCAACGCATT CTTCTACACC
CTGGTTAGCA GCGATACCCA GGAAATGTTT TATTCAGCCA AACGACAACA GTATTTGATT
GATCAGGGAT ATACATTCAA GATTGTCACA AACCTATGTG AGAAGGCTGA CGCCGAGGCC
ATTGCAAACG GTTGCACTTT TGCGACGCCA GAAGACGATC GTAAATTGTT ACGAACGGTT
TTGACGAGCG AGACGGATTT AGAGAAAGAA CAGCGCGCTG AAGACACCGC AATTCGGAAG
AATAACACTG ACGGTGCTGC CTTGGCTGAT GCGGCTTCTA AAAAGACGAC GAGTATGGCC
CAGCTTAGTG GTGGGACTGG ACTGCGTTAC AAAGAGTTTT CTTCGTCAGG GCTACCGAAG
CGGCATCCGT TGTTCCGGAA GAGACAACGT CTCTAGTAGA TTGTCCATGT CTTGAATCGT
TTTTGCTTCT TTGGGACAGC TATAGCTTAA GCTTTTGTAA TCACTAATGT CACTTCTTCT
GCT
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| Protein sequence | MSRPCWTCPD GNIYLEAFHD LYVSAYDFLV AIAEPVARPE FLHQYKLTPY SLYAAVATNI
ETNAIVSVLE RLSKNKLPSQ VIKFIRECTQ KYGKAKLVLK HNRFYVESEF PAVLRELLRD
PTIAQARIVE DVVDASALDA DGFVTQSKAQ EMKENLHMLR EPDDDSEEDE EGLSTGAGGQ
PTKPSNVVVS FQIKPESVEV VKRQAIELDY PLMEEYDFRN DTMNPNVPRM DLKPHTRIRR
YQERSLAKMF GNGRARSGII VLPCGAGKTL TGVTAAQTIK KSVVCLCTNA VSVLQWKYQF
QLWTSIPDEH IAVFTSDHKD KLVDPCVLVT TYTMISYSGK RSAQSQEIMD QITSREWGLL
LMDEVHVVPA KMFRRVVGSV KAHCRLGLTA TLVREDDLIS DLNFLIGPKL YEANWMDLTA
QGYLANVQCV EVWCPMTGPF MKEYLMASNS RLKQLLYVMN PSKLRAVDFL VRFHEARGDK
IIVFSDLVYS LKLYAEMLKK PLIYGETPER ERQAILGTFR ASDAVRTICI SKVGDTSIDL
PEANVIIQVS SHFGSRRQEA QRLGRILRPK SYTQQDGSNR STFNAFFYTL VSSDTQEMFY
SAKRQQYLID QGYTFKIVTN LCEKADAEAI ANGCTFATPE DDRKLLRTVL TSETDLEKEQ
RAEDTAIRKN NTDGAALADA ASKKTTSMAQ LSGGTGLRYK EFSSSGLPKR HPLFRKRQRL
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